RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 SLC9A6Q92581 669 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 TM4SF19Q96DZ7 209 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 GLIPR2Q9H4G4 154 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 CXorf36Q9H7Y0 433 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 BCL2L10Q9HD36 194 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 PCYT1BQ9Y5K3 369 aaPredicted RBP7.92□□□□□ -1.14
USP54-203ENST00000418501 FAAHO00519 579 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 MRPS14O60783 128 aaKnown RBP7.92□□□□□ -1.14
USP54-203ENST00000418501 TNFRSF21O75509 655 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 DNAJB5O75953 348 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 H1F0P07305 194 aaKnown RBP7.92□□□□□ -1.14
USP54-203ENST00000418501 MYF6P23409 242 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 FRKP42685 505 aaPredicted RBP7.92□□□□□ -1.14
USP54-203ENST00000418501 LIM2P55344 173 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 OCA2Q04671 838 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 LASP1Q14847 261 aaKnown RBP7.92□□□□□ -1.14
USP54-203ENST00000418501 ZNF385BQ569K4 471 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 COLEC12Q5KU26 742 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 AP1ARQ63HQ0 302 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 ZC3H14Q6PJT7 736 aaKnown RBP7.92□□□□□ -1.14
USP54-203ENST00000418501 ENPP6Q6UWR7 440 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 OIT3Q8WWZ8 545 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 TMEM19Q96HH6 336 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 HOXD1Q9GZZ0 328 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 RIBC2Q9H4K1 309 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 ZNF696Q9H7X3 374 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 COPS7AQ9UBW8 275 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 NAALAD2Q9Y3Q0 740 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 HCN4Q9Y3Q4 1203 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 OR10H1Q9Y4A9 318 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 PLXNB3Q9ULL4 1909 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 BCKDKO14874 412 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 DBIP07108 87 aaKnown RBP7.92□□□□□ -1.14
USP54-203ENST00000418501 HSD17B7P56937 341 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 POU6F2P78424 691 aaPredicted RBP7.92□□□□□ -1.14
USP54-203ENST00000418501 LIN52Q52LA3 116 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 C6orf52Q5T4I8 152 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 CDC73Q6P1J9 531 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 ZNF440Q8IYI8 595 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 STACQ99469 402 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 GABARAPL1Q9H0R8 117 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 EPS8L2Q9H6S3 715 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 CHCHD3Q9NX63 227 aaKnown RBP7.92□□□□□ -1.14
USP54-203ENST00000418501 SH3GLB1Q9Y371 365 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 ATG4BQ9Y4P1 393 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 A0A1B0GVT2 93 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 A0A1W2PR48 441 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 hCG_2039718K7EN88 272 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 PLOD2O00469 737 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 PRAMEF2O60811 474 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 CTNSO60931 367 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 PGM3O95394 542 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 OR12D1P0DN82 309 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 AGXTP21549 392 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 FNTBP49356 437 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 RGS8P57771 180 aaPredicted RBP7.91□□□□□ -1.14
USP54-203ENST00000418501 TAS2R41P59536 307 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 IL5RAQ01344 420 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 ZNF311Q5JNZ3 666 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 FCRL6Q6DN72 434 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 CASP12Q6UXS9 341 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 LGI4Q8N135 537 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 LILRA2Q8N149 483 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 FAM160A2Q8N612 972 aaPredicted RBP7.91□□□□□ -1.14
USP54-203ENST00000418501 ZNF527Q8NB42 609 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 DRAXINQ8NBI3 349 aaPredicted RBP7.91□□□□□ -1.14
USP54-203ENST00000418501 OR10G2Q8NGC3 310 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 METTL21AQ8WXB1 218 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 ZNF354BQ96LW1 612 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 TMEM27Q9HBJ8 222 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 PAPOLBQ9NRJ5 636 aaKnown RBP7.91□□□□□ -1.14
USP54-203ENST00000418501 GIN1Q9NXP7 522 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 C19orf25Q9UFG5 118 aaPredicted RBP7.91□□□□□ -1.14
USP54-203ENST00000418501 SLC6A14Q9UN76 642 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 KLHL20Q9Y2M5 609 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 ANTXRLA6NF34 631 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 A6NHS1 94 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 STX11O75558 287 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 SEC24DO94855 1032 aaPredicted RBP7.91□□□□□ -1.14
USP54-203ENST00000418501 DCNP07585 359 aaKnown RBP7.91□□□□□ -1.14
USP54-203ENST00000418501 ZNF26P17031 533 aaPredicted RBP7.91□□□□□ -1.14
USP54-203ENST00000418501 FBLP22087 321 aaKnown RBP7.91□□□□□ -1.14
USP54-203ENST00000418501 MAOBP27338 520 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 PEBP1P30086 187 aaKnown RBP7.91□□□□□ -1.14
USP54-203ENST00000418501 DCAF7P61962 342 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 ST3GAL3Q11203 375 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 AMZ1Q400G9 498 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 ADNP2Q6IQ32 1131 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 TMEM107Q6UX40 140 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 GPR141Q7Z602 305 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 SLCO4A1Q96BD0 722 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 DTNBP1Q96EV8 351 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 MMABQ96EY8 250 aaPredicted RBP7.91□□□□□ -1.14
USP54-203ENST00000418501 OR1F2PQ96R84 312 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 ZNF300Q96RE9 604 aaPredicted RBP7.91□□□□□ -1.14
USP54-203ENST00000418501 TRIM8Q9BZR9 551 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 KLHL31Q9H511 634 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 POLR1BQ9H9Y6 1135 aa7.91□□□□□ -1.14
USP54-203ENST00000418501 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.91□□□□□ -1.14
USP54-203ENST00000418501 GPN3Q9UHW5 284 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms