RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 CTRCQ99895 268 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 C17orf62Q9BQA9 187 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 XKR8Q9H6D3 395 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 ANKRA2Q9H9E1 313 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 MGAT4BQ9UQ53 548 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 GPR52Q9Y2T5 361 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 V9GYH0 126 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 LRRK1Q38SD2 2015 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 A0A1W2PS29 197 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 TFECO14948 347 aaPredicted RBP13.7□□□□□ -0.22
HDAC9-208ENST00000417496 UGT2B17O75795 530 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 PRNPP04156 253 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 FHP07954 510 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 NR2F1P10589 423 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 PIPP12273 146 aaPredicted RBP13.7□□□□□ -0.22
HDAC9-208ENST00000417496 HOXB3P14651 431 aaPredicted RBP13.7□□□□□ -0.22
HDAC9-208ENST00000417496 KELP23276 732 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 EPHA5P54756 1037 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 OR2B6P58173 313 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 ZNF79Q15937 498 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 BCL2A1Q16548 175 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 OR2G6Q5TZ20 316 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 C12orf73Q69YU5 71 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 USP30Q70CQ3 517 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 SHFQ7M4L6 423 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 PDZD3Q86UT5 571 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 UBE2J2Q8N2K1 259 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 NANOGP1Q8N7R0 232 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 MRPL43Q8N983 215 aaKnown RBP13.7□□□□□ -0.22
HDAC9-208ENST00000417496 OR6T1Q8NGN1 323 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 TRIM43Q96BQ3 446 aaPredicted RBP13.7□□□□□ -0.22
HDAC9-208ENST00000417496 LRR1Q96L50 414 aa13.7□□□□□ -0.22
HDAC9-208ENST00000417496 TP63Q9H3D4 680 aaPredicted RBP13.7□□□□□ -0.22
HDAC9-208ENST00000417496 MTCL1Q9Y4B5 1905 aaKnown RBP13.7□□□□□ -0.22
HDAC9-208ENST00000417496 C17orf113A0A1B0GUU1 675 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 FAAHO00519 579 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 SLITRK5O94991 958 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 CDRT1O95170 752 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 EPPINO95925 133 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 PCCBP05166 539 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 DAB2P98082 770 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 GINS1Q14691 196 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 C22orf42Q6IC83 251 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 IQCHQ86VS3 1027 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 ZNF557Q8N988 423 aaPredicted RBP13.69□□□□□ -0.22
HDAC9-208ENST00000417496 OR8J1Q8NGP2 316 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 OR9Q1Q8NGQ5 310 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 PIK3R3Q92569 461 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 LINC00615Q96LM1 132 aaPredicted RBP13.69□□□□□ -0.22
HDAC9-208ENST00000417496 TEFMQ96QE5 360 aaKnown RBP13.69□□□□□ -0.22
HDAC9-208ENST00000417496 PLA2G12AQ9BZM1 189 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 NEK6Q9HC98 313 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 DYRK4Q9NR20 520 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 MARK1Q9P0L2 795 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 RPL36Q9Y3U8 105 aaKnown RBP13.69□□□□□ -0.22
HDAC9-208ENST00000417496 NUMA1Q14980 2115 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 FRS3O43559 492 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 SNX4O95219 450 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 EPHX1P07099 455 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 CLTBP09497 229 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 C8orf89P0DMQ9 161 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 ITGB7P26010 798 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 GPC1P35052 558 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 GSTM5P46439 218 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 RFX2P48378 723 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 RORCP51449 518 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 NCF4Q15080 339 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 SYT14P1Q58G82 188 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 ATAT1Q5SQI0 421 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 MFSD4BQ5TF39 518 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 AGAP6Q5VW22 663 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 TMPRSS11AQ6ZMR5 421 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 DCUN1D3Q8IWE4 304 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 LINC01555Q8NAE3 123 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 TP53I13Q8NBR0 393 aaPredicted RBP13.69□□□□□ -0.22
HDAC9-208ENST00000417496 OR4K5Q8NGD3 323 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 AGAP4Q96P64 663 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 AIF1LQ9BQI0 150 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 MND1Q9BWT6 205 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 GLIPR2Q9H4G4 154 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 KLHL31Q9H511 634 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 EGLN3Q9H6Z9 239 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 NEUROD4Q9HD90 331 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 CRNNQ9UBG3 495 aaPredicted RBP13.69□□□□□ -0.22
HDAC9-208ENST00000417496 KLHL3Q9UH77 587 aa13.69□□□□□ -0.22
HDAC9-208ENST00000417496 MYL12BO14950 172 aa13.68□□□□□ -0.22
HDAC9-208ENST00000417496 SCAMP1O15126 338 aa13.68□□□□□ -0.22
HDAC9-208ENST00000417496 ERAL1O75616 437 aaKnown RBP13.68□□□□□ -0.22
HDAC9-208ENST00000417496 SSTR4P31391 388 aa13.68□□□□□ -0.22
HDAC9-208ENST00000417496 BUD31P41223 144 aaPredicted RBP13.68□□□□□ -0.22
HDAC9-208ENST00000417496 CAV3P56539 151 aa13.68□□□□□ -0.22
HDAC9-208ENST00000417496 MLLT1Q03111 559 aaPredicted RBP13.68□□□□□ -0.22
HDAC9-208ENST00000417496 MAP4K2Q12851 820 aa13.68□□□□□ -0.22
HDAC9-208ENST00000417496 TOR1AIP1Q5JTV8 583 aa13.68□□□□□ -0.22
HDAC9-208ENST00000417496 C6orf183Q5T699 404 aa13.68□□□□□ -0.22
HDAC9-208ENST00000417496 NDUFAF5Q5TEU4 345 aa13.68□□□□□ -0.22
HDAC9-208ENST00000417496 SLC30A8Q8IWU4 369 aa13.68□□□□□ -0.22
HDAC9-208ENST00000417496 TBC1D19Q8N5T2 526 aa13.68□□□□□ -0.22
HDAC9-208ENST00000417496 OR52I1Q8NGK6 324 aa13.68□□□□□ -0.22
HDAC9-208ENST00000417496 EFHD2Q96C19 240 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms