RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 H3BQF6 201 aa13.7□□□□□ -0.22
LIMS4-201ENST00000413601 TRIM13O60858 407 aa13.7□□□□□ -0.22
LIMS4-201ENST00000413601 NADKO95544 446 aaPredicted RBP13.7□□□□□ -0.22
LIMS4-201ENST00000413601 IL3P08700 152 aa13.7□□□□□ -0.22
LIMS4-201ENST00000413601 ZNF24P17028 368 aa13.7□□□□□ -0.22
LIMS4-201ENST00000413601 NT5EP21589 574 aa13.7□□□□□ -0.22
LIMS4-201ENST00000413601 PTGER1P34995 402 aa13.7□□□□□ -0.22
LIMS4-201ENST00000413601 DUSP2Q05923 314 aa13.7□□□□□ -0.22
LIMS4-201ENST00000413601 IMPG1Q17R60 797 aa13.7□□□□□ -0.22
LIMS4-201ENST00000413601 C1QL3Q5VWW1 255 aa13.7□□□□□ -0.22
LIMS4-201ENST00000413601 CLEC6AQ6EIG7 209 aa13.7□□□□□ -0.22
LIMS4-201ENST00000413601 FJX1Q86VR8 437 aa13.7□□□□□ -0.22
LIMS4-201ENST00000413601 SIAH3Q8IW03 269 aa13.7□□□□□ -0.22
LIMS4-201ENST00000413601 GALNT12Q8IXK2 581 aa13.7□□□□□ -0.22
LIMS4-201ENST00000413601 TCP10LQ8TDR4 215 aa13.7□□□□□ -0.22
LIMS4-201ENST00000413601 C11orf24Q96F05 449 aaPredicted RBP13.7□□□□□ -0.22
LIMS4-201ENST00000413601 SMC6Q96SB8 1091 aa13.7□□□□□ -0.22
LIMS4-201ENST00000413601 MECRQ9BV79 373 aa13.7□□□□□ -0.22
LIMS4-201ENST00000413601 EBPLQ9BY08 206 aa13.7□□□□□ -0.22
LIMS4-201ENST00000413601 WWTR1Q9GZV5 400 aa13.7□□□□□ -0.22
LIMS4-201ENST00000413601 PTPN13Q12923 2485 aa13.7□□□□□ -0.22
LIMS4-201ENST00000413601 A0A0G2JMM0 328 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 A0A1W2PPB8 328 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 A0A1W2PRS3 328 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 PINLYPA6NC86 204 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 OR6C76A6NM76 312 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 KIR3DP1A8MWS1 328 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 G3V3Y1 287 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 ASNA1O43681 348 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 ANXA4P09525 319 aaPredicted RBP13.69□□□□□ -0.22
LIMS4-201ENST00000413601 UROSP10746 265 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 DRD2P14416 443 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 CSNK2A2P19784 350 aaPredicted RBP13.69□□□□□ -0.22
LIMS4-201ENST00000413601 TIA1P31483 386 aaKnown RBP eCLIP13.69□□□□□ -0.22
LIMS4-201ENST00000413601 ZNF844Q08AG5 666 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 FUT7Q11130 342 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 EBPQ15125 230 aaKnown RBP13.69□□□□□ -0.22
LIMS4-201ENST00000413601 KRT71Q3SY84 523 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 KRTCAP3Q53RY4 240 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 C6orf163Q5TEZ5 329 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 GALNT18Q6P9A2 607 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 FAM111BQ6SJ93 734 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 RTL4Q6ZR62 310 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 TRIM46Q7Z4K8 759 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 ZNF615Q8N8J6 731 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 ZFP62Q8NB50 900 aaPredicted RBP13.69□□□□□ -0.22
LIMS4-201ENST00000413601 POGLUT1Q8NBL1 392 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 ADCY4Q8NFM4 1077 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 SLC22A8Q8TCC7 542 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 C16orf78Q8WTQ4 265 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 ZBTB9Q96C00 473 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 CNRIP1Q96F85 164 aaPredicted RBP13.69□□□□□ -0.22
LIMS4-201ENST00000413601 BRINP2Q9C0B6 783 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 UTS2RQ9UKP6 389 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 PSME2Q9UL46 239 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 FIS1Q9Y3D6 152 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 ZNF780BQ9Y6R6 833 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 FREM3P0C091 2139 aa13.69□□□□□ -0.22
LIMS4-201ENST00000413601 SETXQ7Z333 2677 aaKnown RBP13.68□□□□□ -0.22
LIMS4-201ENST00000413601 LRRK2Q5S007 2527 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 TRGV8A0A0C4DH27 118 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 A0A1B0GUH1 482 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 C2orf92A0A1B0GVN3 265 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 A1L4Q6 167 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 TFECO14948 347 aaPredicted RBP13.68□□□□□ -0.22
LIMS4-201ENST00000413601 ZNHIT1O43257 154 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 ATP1B1P05026 303 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 S1PR1P21453 382 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 HSF1Q00613 529 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 RBPJQ06330 500 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 MGAT2Q10469 447 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 PRICKLE4Q2TBC4 344 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 ZNF791Q3KP31 576 aaPredicted RBP13.68□□□□□ -0.22
LIMS4-201ENST00000413601 LYPD8Q6UX82 237 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 SLC15A4Q8N697 577 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 GOLM1Q8NBJ4 401 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 OR2M7Q8NG81 312 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 C16orf52Q8NHV5 167 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 CDC26Q8NHZ8 85 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 EXOSC8Q96B26 276 aaKnown RBP13.68□□□□□ -0.22
LIMS4-201ENST00000413601 SGCZQ96LD1 299 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 ZNF681Q96N22 645 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 OR10A5Q9H207 317 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 RRAGDQ9NQL2 400 aaPredicted RBP13.68□□□□□ -0.22
LIMS4-201ENST00000413601 SIRT5Q9NXA8 310 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 MAT2BQ9NZL9 334 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 SH3BGRL2Q9UJC5 107 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 PTGDR2Q9Y5Y4 395 aa13.68□□□□□ -0.22
LIMS4-201ENST00000413601 FLNBO75369 2602 aaKnown RBP13.68□□□□□ -0.22
LIMS4-201ENST00000413601 HECTD1Q9ULT8 2610 aa13.67□□□□□ -0.22
LIMS4-201ENST00000413601 AZIN1O14977 448 aa13.67□□□□□ -0.22
LIMS4-201ENST00000413601 HS6ST1O60243 411 aa13.67□□□□□ -0.22
LIMS4-201ENST00000413601 SLC19A2O60779 497 aa13.67□□□□□ -0.22
LIMS4-201ENST00000413601 P04436 131 aa13.67□□□□□ -0.22
LIMS4-201ENST00000413601 CHRNGP07510 517 aa13.67□□□□□ -0.22
LIMS4-201ENST00000413601 CCL3P10147 92 aa13.67□□□□□ -0.22
LIMS4-201ENST00000413601 GP1BBP13224 206 aa13.67□□□□□ -0.22
LIMS4-201ENST00000413601 CNR1P21554 472 aa13.67□□□□□ -0.22
LIMS4-201ENST00000413601 SOX18P35713 384 aa13.67□□□□□ -0.22
LIMS4-201ENST00000413601 NR0B1P51843 470 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms