RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 DCLRE1BQ9H816 532 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 ZNF304Q9HCX3 659 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 S100A14Q9HCY8 104 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 APMAPQ9HDC9 416 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 LANCL2Q9NS86 450 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 ZCCHC3Q9NUD5 404 aaKnown RBP6.24□□□□□ -1.41
VPS41-204ENST00000413141 OCIAD1Q9NX40 245 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 TOR4AQ9NXH8 423 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 RAPGEFL1Q9UHV5 662 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 CDC14AQ9UNH5 594 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 MAP4K5Q9Y4K4 846 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 CLDN16Q9Y5I7 305 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 CROCCQ5TZA2 2017 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 RALGAPA1Q6GYQ0 2036 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 SCN3AQ9NY46 2000 aa6.24□□□□□ -1.41
VPS41-204ENST00000413141 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 IGKV3D-11A0A0A0MRZ8 115 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 DHRS12A0PJE2 317 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 UPK1AO00322 258 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 PLOD2O00469 737 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 CXCR6O00574 342 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 CLDN4O14493 209 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 GSTA4O15217 222 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 EMC8O43402 210 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 FOXD2O60548 495 aaPredicted RBP6.23□□□□□ -1.41
VPS41-204ENST00000413141 CTNSO60931 367 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 JRKO75564 520 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 SLC35E2P0CK97 266 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 ARAFP10398 606 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 MAOAP21397 527 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 NT5EP21589 574 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 IL10P22301 178 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 PSMA4P25789 261 aaKnown RBP6.23□□□□□ -1.41
VPS41-204ENST00000413141 SOX18P35713 384 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 MAGEA8P43361 318 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 KHKP50053 298 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 DSTNP60981 165 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 AP2B1P63010 937 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 BTG2P78543 158 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 PRR5P85299 388 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 INSM1Q01101 510 aaPredicted RBP6.23□□□□□ -1.41
VPS41-204ENST00000413141 RBBP4Q09028 425 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 STX4Q12846 297 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 VEZF1Q14119 521 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 MAP7Q14244 749 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 ERV3-1Q14264 604 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 IL11RAQ14626 422 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 SNCBQ16143 134 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 PRICKLE4Q2TBC4 344 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.23□□□□□ -1.41
VPS41-204ENST00000413141 FHL5Q5TD97 284 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 CDCP2Q5VXM1 449 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 ZNF385CQ66K41 422 aaPredicted RBP6.23□□□□□ -1.41
VPS41-204ENST00000413141 ZFP1Q6P2D0 407 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 TNFAIP8L2Q6P589 184 aaPredicted RBP6.23□□□□□ -1.41
VPS41-204ENST00000413141 BHLHB9Q6PI77 547 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 CEACAM20Q6UY09 585 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 QSOX2Q6ZRP7 698 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 COX15Q7KZN9 410 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 C6orf120Q7Z4R8 191 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 PIP4P1Q86T03 277 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 BPHLQ86WA6 291 aaPredicted RBP6.23□□□□□ -1.41
VPS41-204ENST00000413141 ADGRG5Q8IZF4 528 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 ST13P4Q8IZP2 240 aaPredicted RBP6.23□□□□□ -1.41
VPS41-204ENST00000413141 HORMAD2Q8N7B1 307 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 SLC38A9Q8NBW4 561 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 C11orf65Q8NCR3 313 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 NUP43Q8NFH3 380 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 ADCY4Q8NFM4 1077 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 OR52E4Q8NGH9 312 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 KAT2AQ92830 837 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 MAL2Q969L2 176 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 FAM162AQ96A26 154 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 COL26A1Q96A83 441 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 CLIP3Q96DZ5 547 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 RNF31Q96EP0 1072 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 GIMAP5Q96F15 307 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 DUS3LQ96G46 650 aaKnown RBP6.23□□□□□ -1.41
VPS41-204ENST00000413141 MAGED4Q96JG8 741 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 MS4A4EQ96PG1 132 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 CTRCQ99895 268 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 KRTAP3-3Q9BYR6 98 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 KRTAP3-2Q9BYR7 98 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 SLC7A5P2Q9GIP4 190 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 RASSF4Q9H2L5 321 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 TMEM38AQ9H6F2 299 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 GORASP2Q9H8Y8 452 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 ANKRA2Q9H9E1 313 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 C3orf14Q9HBI5 128 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 A4GALTQ9NPC4 353 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 MKKSQ9NPJ1 570 aaPredicted RBP6.23□□□□□ -1.41
VPS41-204ENST00000413141 PRTFDC1Q9NRG1 225 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 SLC22A11Q9NSA0 550 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 DDX18Q9NVP1 670 aaKnown RBP6.23□□□□□ -1.41
VPS41-204ENST00000413141 MAT2BQ9NZL9 334 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 NTMQ9P121 344 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 PTGFRNQ9P2B2 879 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 STX18Q9P2W9 335 aaKnown RBP6.23□□□□□ -1.41
VPS41-204ENST00000413141 TRPC4Q9UBN4 977 aa6.23□□□□□ -1.41
VPS41-204ENST00000413141 CTSFQ9UBX1 484 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms