RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 GAGE6Q13070 117 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 DNAJC3Q13217 504 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 STX3Q13277 289 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 TRIM29Q14134 588 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 GCKRQ14397 625 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 C16orf72Q14CZ0 275 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 NPTX1Q15818 432 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 MAPK6Q16659 721 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 EXOC3L4Q17RC7 722 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 RGS21Q2M5E4 152 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 ZBED5Q49AG3 693 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 DNAL1Q4LDG9 190 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 MDH1BQ5I0G3 518 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 TCTE1Q5JU00 501 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 MPP7Q5T2T1 576 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 C6orf183Q5T699 404 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 MFSD12Q6NUT3 480 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 TTC27Q6P3X3 843 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 MOXD1Q6UVY6 613 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 CCBE1Q6UXH8 406 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 CEACAM20Q6UY09 585 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 C4orf22Q6V702 233 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 KIF6Q6ZMV9 814 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 SH2D5Q6ZV89 423 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 ZNF571Q7Z3V5 609 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 SPATA19Q7Z5L4 167 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 ADAMTSL2Q86TH1 951 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 TLK2Q86UE8 772 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 COMMD2Q86X83 199 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 GPALPP1Q8IXQ4 340 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 TIGD4Q8IY51 512 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 SLC38A6Q8IZM9 456 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 SYCE1Q8N0S2 351 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 NATD1Q8N6N6 113 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 ZNF611Q8N823 705 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 SLC4A11Q8NBS3 891 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 KIAA0895Q8NCT3 520 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 SLC24A4Q8NFF2 622 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 OR5M8Q8NGP6 311 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 C9orf43Q8TAL5 461 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 CCDC110Q8TBZ0 833 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 SLC2A14Q8TDB8 520 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 RNF128Q8TEB7 428 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 STMN2Q93045 179 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 MOB3AQ96BX8 217 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 GIMAP5Q96F15 307 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 ALG14Q96F25 216 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 OXNAD1Q96HP4 312 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 SGK494Q96LW2 274 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 C17orf77Q96MU5 243 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 CPNE1Q99829 537 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 OSBPL8Q9BZF1 889 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 NDEL1Q9GZM8 345 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 CSTL1Q9H114 145 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 RSPH9Q9H1X1 276 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 CDC42EP4Q9H3Q1 356 aaKnown RBP2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 FZD8Q9H461 694 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 ARMC7Q9H6L4 198 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 LRRC19Q9H756 370 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 SIAEQ9HAT2 523 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 SLC38A10Q9HBR0 1119 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 ACKR4Q9NPB9 350 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 MYNNQ9NPC7 610 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 SLCO1B3Q9NPD5 702 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 FAM118AQ9NWS6 357 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 COMMD8Q9NX08 183 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 OSER1Q9NX31 292 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 NKIRAS1Q9NYS0 192 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 NINJ2Q9NZG7 142 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 C6orf203Q9P0P8 240 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 SENP1Q9P0U3 644 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 MTRF1LQ9UGC7 380 aaKnown RBP2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 KCNN3Q9UGI6 736 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 FETUBQ9UGM5 382 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 ARMCX3Q9UH62 379 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 PTBP2Q9UKA9 531 aaKnown RBP2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 DNAJC12Q9UKB3 198 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 CPSF3Q9UKF6 684 aaKnown RBP2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 RALYQ9UKM9 306 aaKnown RBP2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 SNX7Q9UNH6 387 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 FAF1Q9UNN5 650 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 KCNJ14Q9UNX9 436 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 SATB2Q9UPW6 733 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 SNX24Q9Y343 169 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 RNF11Q9Y3C5 154 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 CPQQ9Y646 472 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 SPIN1Q9Y657 262 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 POMT1Q9Y6A1 747 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 MAD1L1Q9Y6D9 718 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 ZFP37Q9Y6Q3 630 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 TECPR2O15040 1411 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 MYH1P12882 1939 aa2.23□□□□□ -2.05
HMGB3P2-201ENST00000411913 SF3B1O75533 1304 aaKnown RBP eCLIP2.22□□□□□ -2.05
HMGB3P2-201ENST00000411913 PSME4Q14997 1843 aa2.22□□□□□ -2.05
HMGB3P2-201ENST00000411913 HYKKA2RU49 373 aa2.22□□□□□ -2.05
HMGB3P2-201ENST00000411913 ARHGEF35A5YM69 484 aa2.22□□□□□ -2.05
HMGB3P2-201ENST00000411913 OR5K4A6NMS3 321 aa2.22□□□□□ -2.05
HMGB3P2-201ENST00000411913 MIF4GDA9UHW6 222 aaKnown RBP2.22□□□□□ -2.05
HMGB3P2-201ENST00000411913 RSPH10B2B2RC85 870 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms