RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 FRMD7Q6ZUT3 714 aa17.59■□□□□ 0.41
SF3A1-202ENST00000411423 GHDCQ8N2G8 530 aa17.59■□□□□ 0.41
SF3A1-202ENST00000411423 CNRIP1Q96F85 164 aaPredicted RBP17.59■□□□□ 0.41
SF3A1-202ENST00000411423 ZNF681Q96N22 645 aa17.59■□□□□ 0.41
SF3A1-202ENST00000411423 SHCBP1LQ9BZQ2 653 aa17.59■□□□□ 0.41
SF3A1-202ENST00000411423 A0A1B0GTH9 108 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 TLDC2A0PJX2 215 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 C1orf226A1L170 272 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 FAM166BA8MTA8 275 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 COPEO14579 308 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 DYRK3O43781 588 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 ZNF500O60304 480 aaPredicted RBP17.58■□□□□ 0.4
SF3A1-202ENST00000411423 CDH16O75309 829 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 PDE9AO76083 593 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 GLSO94925 669 aaPredicted RBP17.58■□□□□ 0.4
SF3A1-202ENST00000411423 LRATO95237 230 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 ENO1P06733 434 aaKnown RBP17.58■□□□□ 0.4
SF3A1-202ENST00000411423 IL3P08700 152 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 NUDT17P0C025 328 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 CNR1P21554 472 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 NT5EP21589 574 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 PER3P56645 1201 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 DNAJB13P59910 316 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 FOXO1Q12778 655 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 PCLAFQ15004 111 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 CDSNQ15517 529 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 LTB4RQ15722 352 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 PRICKLE4Q2TBC4 344 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 CCDC153Q494R4 210 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 MYO7BQ6PIF6 2116 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 OPN5Q6U736 354 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 GALNT12Q8IXK2 581 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 GOLM1Q8NBJ4 401 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 ADIPOR1Q96A54 375 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 MAGED4Q96JG8 741 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 PHF12Q96QT6 1004 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 EBPLQ9BY08 206 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 TTTY12Q9BZ98 90 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 DEFB127Q9H1M4 99 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 PPCSQ9HAB8 311 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 PLSCR2Q9NRY7 297 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 OXSMQ9NWU1 459 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 TUBA8Q9NY65 449 aaPredicted RBP17.58■□□□□ 0.4
SF3A1-202ENST00000411423 MCM8Q9UJA3 840 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 GRID1Q9ULK0 1009 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 LIPGQ9Y5X9 500 aa17.58■□□□□ 0.4
SF3A1-202ENST00000411423 CRYBG3Q68DQ2 2970 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 SERTM1A2A2V5 107 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 ADAM10O14672 748 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 PCDH7O60245 1069 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 CDC40O60508 579 aaKnown RBP eCLIP17.57■□□□□ 0.4
SF3A1-202ENST00000411423 ERAL1O75616 437 aaKnown RBP17.57■□□□□ 0.4
SF3A1-202ENST00000411423 FBXO45P0C2W1 286 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 CPA3P15088 417 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 PORP16435 677 aaPredicted RBP17.57■□□□□ 0.4
SF3A1-202ENST00000411423 DCTP40126 519 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 CCT5P48643 541 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 BTKQ06187 659 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 C3P1Q6ZMU1 363 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 SLC29A4Q7RTT9 530 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 DOLPP1Q86YN1 238 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 C10orf107Q8IVU9 208 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 ADCY4Q8NFM4 1077 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 OR10G3Q8NGC4 313 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 SPACA9Q96E40 222 aaPredicted RBP17.57■□□□□ 0.4
SF3A1-202ENST00000411423 CCDC126Q96EE4 140 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 OR10A5Q9H207 317 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 MAT2BQ9NZL9 334 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 ZNF639Q9UID6 485 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 DLGAP4Q9Y2H0 992 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 STK38LQ9Y2H1 464 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 PTGDR2Q9Y5Y4 395 aa17.57■□□□□ 0.4
SF3A1-202ENST00000411423 OR6C76A6NM76 312 aa17.56■□□□□ 0.4
SF3A1-202ENST00000411423 SLU7O95391 586 aaKnown RBP17.56■□□□□ 0.4
SF3A1-202ENST00000411423 CELA3AP09093 270 aa17.56■□□□□ 0.4
SF3A1-202ENST00000411423 CREB1P16220 341 aa17.56■□□□□ 0.4
SF3A1-202ENST00000411423 GRNP28799 593 aaKnown RBP17.56■□□□□ 0.4
SF3A1-202ENST00000411423 ALDH9A1P49189 494 aa17.56■□□□□ 0.4
SF3A1-202ENST00000411423 PPIAP62937 165 aaKnown RBP17.56■□□□□ 0.4
SF3A1-202ENST00000411423 TRA2BP62995 288 aaKnown RBP17.56■□□□□ 0.4
SF3A1-202ENST00000411423 EXOSC7Q15024 291 aaKnown RBP17.56■□□□□ 0.4
SF3A1-202ENST00000411423 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.56■□□□□ 0.42e-7■□□□□ 10
SF3A1-202ENST00000411423 PRAMEF20Q5VT98 475 aa17.56■□□□□ 0.4
SF3A1-202ENST00000411423 TRABD2AQ86V40 505 aa17.56■□□□□ 0.4
SF3A1-202ENST00000411423 TMEM251Q8N6I4 163 aa17.56■□□□□ 0.4
SF3A1-202ENST00000411423 GBP7Q8N8V2 638 aaPredicted RBP17.56■□□□□ 0.4
SF3A1-202ENST00000411423 BANPQ8N9N5 519 aa17.56■□□□□ 0.4
SF3A1-202ENST00000411423 RDH11Q8TC12 318 aa17.56■□□□□ 0.4
SF3A1-202ENST00000411423 SLC22A8Q8TCC7 542 aa17.56■□□□□ 0.4
SF3A1-202ENST00000411423 PAQR8Q8TEZ7 354 aa17.56■□□□□ 0.4
SF3A1-202ENST00000411423 C16orf78Q8WTQ4 265 aa17.56■□□□□ 0.4
SF3A1-202ENST00000411423 KLHL29Q96CT2 875 aa17.56■□□□□ 0.4
SF3A1-202ENST00000411423 SGCZQ96LD1 299 aa17.56■□□□□ 0.4
SF3A1-202ENST00000411423 FAM173AQ9BQD7 235 aa17.56■□□□□ 0.4
SF3A1-202ENST00000411423 GATA5Q9BWX5 397 aaPredicted RBP17.56■□□□□ 0.4
SF3A1-202ENST00000411423 ZDHHC11Q9H8X9 412 aa17.56■□□□□ 0.4
SF3A1-202ENST00000411423 ANKRA2Q9H9E1 313 aa17.56■□□□□ 0.4
SF3A1-202ENST00000411423 SACM1LQ9NTJ5 587 aa17.56■□□□□ 0.4
SF3A1-202ENST00000411423 NMRK1Q9NWW6 199 aa17.56■□□□□ 0.4
SF3A1-202ENST00000411423 SLC17A7Q9P2U7 560 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms