RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 RNF121Q9H920 327 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 FANCEQ9HB96 536 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 TBC1D13Q9NVG8 400 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 BCAP29Q9UHQ4 241 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 MAN1B1Q9UKM7 699 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 ICAM5Q9UMF0 924 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 ATG4BQ9Y4P1 393 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 LRP12Q9Y561 859 aa4.52□□□□□ -1.69
LSM5-206ENST00000409987 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.52□□□□□ -1.69
LSM5-206ENST00000409987 CLSPNQ9HAW4 1339 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 STK36Q9NRP7 1315 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 A0A0G2JLW4 131 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 CCDC162PA2VCL2 907 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 GSAPA4D1B5 854 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 NCF1BA6NI72 391 aaPredicted RBP4.51□□□□□ -1.69
LSM5-206ENST00000409987 IFITM10A6NMD0 228 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 NCF1CA8MVU1 366 aaPredicted RBP4.51□□□□□ -1.69
LSM5-206ENST00000409987 SNURFLB1AK76 121 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 ERVV-2B6SEH9 535 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 EXTL3O43909 919 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 NEMFO60524 1076 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 TRMUO75648 421 aaKnown RBP4.51□□□□□ -1.69
LSM5-206ENST00000409987 ZNF432O94892 652 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 EPOP01588 193 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 GSTA2P09210 222 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 ANXA8P13928 327 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 NCF2P19878 526 aaPredicted RBP4.51□□□□□ -1.69
LSM5-206ENST00000409987 AXLP30530 894 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 DNA2P51530 1060 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 SUCLG1P53597 346 aaKnown RBP4.51□□□□□ -1.69
LSM5-206ENST00000409987 NAPAP54920 295 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 CNTN2Q02246 1040 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 TATDN3Q17R31 274 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 GTDC1Q4AE62 458 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 ZNF542PQ5EBM4 170 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 ZNF311Q5JNZ3 666 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 PHYHD1Q5SRE7 291 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 ANXA8L1Q5VT79 327 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 LIPKQ5VXJ0 399 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 ASPHD2Q6ICH7 369 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 FAM53AQ6NSI3 398 aaPredicted RBP4.51□□□□□ -1.69
LSM5-206ENST00000409987 NBPF5PQ86XG9 351 aaPredicted RBP4.51□□□□□ -1.69
LSM5-206ENST00000409987 CCDC60Q8IWA6 550 aaPredicted RBP4.51□□□□□ -1.69
LSM5-206ENST00000409987 PHC2Q8IXK0 858 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 SLC43A2Q8N370 569 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 MARVELD2Q8N4S9 558 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 NIPA2Q8N8Q9 360 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 OR1L3Q8NH93 324 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 OSTF1Q92882 214 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 RASD2Q96D21 266 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 MRPL53Q96EL3 112 aaKnown RBP4.51□□□□□ -1.69
LSM5-206ENST00000409987 LRR1Q96L50 414 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 C10orf90Q96M02 699 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 CDCA3Q99618 268 aaPredicted RBP4.51□□□□□ -1.69
LSM5-206ENST00000409987 WRAP53Q9BUR4 548 aaKnown RBP4.51□□□□□ -1.69
LSM5-206ENST00000409987 NUSAP1Q9BXS6 441 aaKnown RBP4.51□□□□□ -1.69
LSM5-206ENST00000409987 ATP13A3Q9H7F0 1226 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 FN3KRPQ9HA64 309 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 CALHM2Q9HA72 323 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 ZNF71Q9NQZ8 489 aaPredicted RBP4.51□□□□□ -1.69
LSM5-206ENST00000409987 ETNK2Q9NVF9 386 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 OR6C2Q9NZP2 312 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 RNF14Q9UBS8 474 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 C19orf25Q9UFG5 118 aaPredicted RBP4.51□□□□□ -1.69
LSM5-206ENST00000409987 SLC12A6Q9UHW9 1150 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 CFAP45Q9UL16 551 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 ZNF490Q9ULM2 529 aaPredicted RBP4.51□□□□□ -1.69
LSM5-206ENST00000409987 B9D1Q9UPM9 204 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 PLCL2Q9UPR0 1127 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 PPP2R2CQ9Y2T4 447 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 AP4B1Q9Y6B7 739 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 NUP160Q12769 1436 aa4.51□□□□□ -1.69
LSM5-206ENST00000409987 ZMYM6O95789 1325 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 SERTM2A0A1B0GWG4 89 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 HELTA6NFD8 242 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 MSGN1A6NI15 193 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 PRSS44E7EML9 344 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 BLOC1S5-TXNDC5H3BN57 136 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 KLF11O14901 512 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 EPHB6O15197 1021 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 ZNF208O43345 1280 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 ECE2O60344 883 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 UFL1O94874 794 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 SLITRK3O94933 977 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 MBD3O95983 291 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 IGHEP01854 428 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 MT-ND1P03886 318 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 HIST1H2AGP0C0S8 130 aaPredicted RBP4.5□□□□□ -1.69
LSM5-206ENST00000409987 PRSS56P0CW18 603 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 ODC1P11926 461 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 TRIM23P36406 574 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 CEBPDP49716 269 aaPredicted RBP4.5□□□□□ -1.69
LSM5-206ENST00000409987 LBX1P52954 281 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 PRMT2P55345 433 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 CLDN17P56750 224 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 RPL23AP62750 156 aaKnown RBP4.5□□□□□ -1.69
LSM5-206ENST00000409987 NUCB2P80303 420 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 MYL7Q01449 175 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 GABPAQ06546 454 aa4.5□□□□□ -1.69
LSM5-206ENST00000409987 DMTNQ08495 405 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms