RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 FLRT3Q9NZU0 649 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 PIPOXQ9P0Z9 390 aa4.4□□□□□ -1.71
LSM5-205ENST00000409952 DBF4Q9UBU7 674 aaPredicted RBP4.4□□□□□ -1.71
LSM5-205ENST00000409952 EIF4G1Q04637 1599 aaKnown RBP4.4□□□□□ -1.71
LSM5-205ENST00000409952 A0A1B0GVT2 93 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 SH3PXD2BA1X283 911 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 MTMR11A4FU01 709 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 LINC01553A4QN01 128 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 HNRNPCL2B2RXH8 293 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 PROB1E7EW31 1015 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 CCSO14618 274 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 POLR3GO15318 223 aaPredicted RBP4.39□□□□□ -1.71
LSM5-205ENST00000409952 XPNPEP2O43895 674 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 STK17BO94768 372 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 ALPIP09923 528 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 TMEM191BP0C7N4 346 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 UQCRBP14927 111 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 FOSL2P15408 326 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 CD9P21926 228 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 PCMT1P22061 227 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 GLRA1P23415 457 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 CTNNA2P26232 953 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 SEC61GP60059 68 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 CDKL1Q00532 357 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 LGALS3BPQ08380 585 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 CNTN1Q12860 1018 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 STK11Q15831 433 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 CDKN3Q16667 212 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 ODF3L2Q3SX64 289 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 LRRC37A5PQ49AS3 106 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 FBXO48Q5FWF7 155 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 XKR3Q5GH77 459 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 C10orf25Q5T742 122 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 LRRC66Q68CR7 880 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 RFPL4BQ6ZWI9 263 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 SLC24A5Q71RS6 500 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 BZW1Q7L1Q6 419 aaKnown RBP4.39□□□□□ -1.71
LSM5-205ENST00000409952 ASRGL1Q7L266 308 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 DPY19L4Q7Z388 723 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 P4HA3Q7Z4N8 544 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 KMT5CQ86Y97 462 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 PLD3Q8IV08 490 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 TEX26Q8N6G2 289 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 NFAM1Q8NET5 270 aaPredicted RBP4.39□□□□□ -1.71
LSM5-205ENST00000409952 SPATA4Q8NEY3 305 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 OR7A2PQ8NGA2 310 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 OR8K3Q8NH51 312 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 RDH11Q8TC12 318 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 CD99L2Q8TCZ2 262 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 MCUR1Q96AQ8 359 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 NXPE2Q96DL1 559 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 ZNF274Q96GC6 653 aaPredicted RBP4.39□□□□□ -1.71
LSM5-205ENST00000409952 C10orf90Q96M02 699 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 AGAP3Q96P47 875 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 ERGIC2Q96RQ1 377 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 CHP1Q99653 195 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 CITED1Q99966 193 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 CHRDL1Q9BU40 450 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 TRIM9Q9C026 710 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 EBF3Q9H4W6 596 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 POLD4Q9HCU8 107 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 S100A14Q9HCY8 104 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.39□□□□□ -1.71
LSM5-205ENST00000409952 UFSP2Q9NUQ7 469 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 C19orf25Q9UFG5 118 aaPredicted RBP4.39□□□□□ -1.71
LSM5-205ENST00000409952 MAN1B1Q9UKM7 699 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 KCNS2Q9ULS6 477 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 RNF6Q9Y252 685 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 KLHDC2Q9Y2U9 406 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 WDR45Q9Y484 360 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 KIF7Q2M1P5 1343 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 PHLPP2Q6ZVD8 1323 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 TNIKQ9UKE5 1360 aa4.39□□□□□ -1.71
LSM5-205ENST00000409952 ARHGEF17Q96PE2 2063 aaPredicted RBP4.38□□□□□ -1.71
LSM5-205ENST00000409952 A0A087WUV0 522 aaPredicted RBP4.38□□□□□ -1.71
LSM5-205ENST00000409952 A0A1B0GTQ1 180 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 MANSC4A6NHS7 340 aaPredicted RBP4.38□□□□□ -1.71
LSM5-205ENST00000409952 FOXE1O00358 373 aaPredicted RBP4.38□□□□□ -1.71
LSM5-205ENST00000409952 SH2D1BO14796 132 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 ALOX15BO15296 676 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 RNF113AO15541 343 aaKnown RBP4.38□□□□□ -1.71
LSM5-205ENST00000409952 P2RX6O15547 441 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 SAP30O75446 220 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 SCGNO76038 276 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 OTCP00480 354 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 CELA2AP08217 269 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 OR8G3PP0DMU2 310 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 TROVE2P10155 538 aaKnown RBP eCLIP4.38□□□□□ -1.71
LSM5-205ENST00000409952 TPSB2P20231 275 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 EFNA1P20827 205 aaPredicted RBP4.38□□□□□ -1.71
LSM5-205ENST00000409952 MPGP29372 298 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 CDC25AP30304 524 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 RFX2P48378 723 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 DNA2P51530 1060 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 CDH11P55287 796 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 SSBP2P81877 361 aaPredicted RBP4.38□□□□□ -1.71
LSM5-205ENST00000409952 MYL7Q01449 175 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 BNC1Q01954 994 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 ACY1Q03154 408 aa4.38□□□□□ -1.71
LSM5-205ENST00000409952 RELQ04864 619 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms