RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 ZNF770Q6IQ21 691 aaPredicted RBP18.98■□□□□ 0.63
USP39-204ENST00000409766 DHRS4L2Q6PKH6 230 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 TRIM48Q8IWZ4 208 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 ZNF540Q8NDQ6 660 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 ZFPM2Q8WW38 1151 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 MOAP1Q96BY2 351 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 ZNF556Q9HAH1 456 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 ACTR10Q9NZ32 417 aa18.98■□□□□ 0.63
USP39-204ENST00000409766 A0A1W2PPW3 197 aa18.97■□□□□ 0.63
USP39-204ENST00000409766 OR6C74A6NCV1 312 aa18.97■□□□□ 0.63
USP39-204ENST00000409766 NOL3O60936 208 aaKnown RBP18.97■□□□□ 0.63
USP39-204ENST00000409766 TNFP01375 233 aa18.97■□□□□ 0.63
USP39-204ENST00000409766 FHP07954 510 aa18.97■□□□□ 0.63
USP39-204ENST00000409766 SLC35G6P0C7Q6 338 aa18.97■□□□□ 0.63
USP39-204ENST00000409766 PPP2R1BP30154 601 aa18.97■□□□□ 0.63
USP39-204ENST00000409766 CCR5P51681 352 aa18.97■□□□□ 0.63
USP39-204ENST00000409766 LASP1Q14847 261 aaKnown RBP18.97■□□□□ 0.63
USP39-204ENST00000409766 FCRL6Q6DN72 434 aa18.97■□□□□ 0.63
USP39-204ENST00000409766 TMEM107Q6UX40 140 aa18.97■□□□□ 0.63
USP39-204ENST00000409766 Q6ZS52 159 aa18.97■□□□□ 0.63
USP39-204ENST00000409766 PARP8Q8N3A8 854 aa18.97■□□□□ 0.63
USP39-204ENST00000409766 OR56A1Q8NGH5 318 aa18.97■□□□□ 0.63
USP39-204ENST00000409766 OR4D11Q8NGI4 311 aa18.97■□□□□ 0.63
USP39-204ENST00000409766 MIPOL1Q8TD10 442 aa18.97■□□□□ 0.63
USP39-204ENST00000409766 RAB2BQ8WUD1 216 aa18.97■□□□□ 0.63
USP39-204ENST00000409766 PATE1Q8WXA2 126 aa18.97■□□□□ 0.63
USP39-204ENST00000409766 FKBP10Q96AY3 582 aa18.97■□□□□ 0.63
USP39-204ENST00000409766 TCEAL2Q9H3H9 227 aaPredicted RBP18.97■□□□□ 0.63
USP39-204ENST00000409766 NMNAT1Q9HAN9 279 aaPredicted RBP18.97■□□□□ 0.63
USP39-204ENST00000409766 BCL2L10Q9HD36 194 aa18.97■□□□□ 0.63
USP39-204ENST00000409766 GSAPA4D1B5 854 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 MRPS14O60783 128 aaKnown RBP18.96■□□□□ 0.63
USP39-204ENST00000409766 FAM20BO75063 409 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 SMIM10L1P0DMW3 83 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 GSSP48637 474 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 ANXA11P50995 505 aaKnown RBP18.96■□□□□ 0.63
USP39-204ENST00000409766 CSNK2BP67870 215 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 FUT5Q11128 374 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 FIGLAQ6QHK4 219 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 OR10G6Q8NH81 332 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 OTUB1Q96FW1 271 aaPredicted RBP18.96■□□□□ 0.63
USP39-204ENST00000409766 MSANTD3Q96H12 275 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 SMIM10Q96HG1 83 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 DHRS1Q96LJ7 313 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 WFDC6Q9BQY6 131 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 CCNB1IP1Q9NPC3 277 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 GIMAP4Q9NUV9 329 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 PILRAQ9UKJ1 303 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 NDRG2Q9UN36 371 aaKnown RBP18.96■□□□□ 0.63
USP39-204ENST00000409766 ZNF99A8MXY4 864 aaPredicted RBP18.96■□□□□ 0.63
USP39-204ENST00000409766 P2RX6O15547 441 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 NR2F6P10588 404 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 POU2F1P14859 743 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 CCNA2P20248 432 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 POU3F3P20264 500 aaPredicted RBP18.96■□□□□ 0.63
USP39-204ENST00000409766 ACVR2AP27037 513 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 MAPK10P53779 464 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 CRISP3P54108 245 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 KIAA0895LQ68EN5 471 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 KRT73Q86Y46 540 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 RBM45Q8IUH3 476 aaKnown RBP18.96■□□□□ 0.63
USP39-204ENST00000409766 AQP11Q8NBQ7 271 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 RHOXF1Q8NHV9 184 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 FAM81AQ8TBF8 368 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 KLHL6Q8WZ60 621 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 ELP4Q96EB1 424 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 TOE1Q96GM8 510 aaKnown RBP18.96■□□□□ 0.63
USP39-204ENST00000409766 C10orf90Q96M02 699 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 SIGLEC11Q96RL6 698 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 CSF3RQ99062 836 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 SH3GL3Q99963 347 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 YIPF4Q9BSR8 244 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 FUNDC2Q9BWH2 189 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 GPN2Q9H9Y4 310 aaPredicted RBP18.96■□□□□ 0.63
USP39-204ENST00000409766 POLMQ9NP87 494 aaPredicted RBP18.96■□□□□ 0.63
USP39-204ENST00000409766 CPNE7Q9UBL6 633 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 PSME2Q9UL46 239 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 ZNF780BQ9Y6R6 833 aa18.96■□□□□ 0.63
USP39-204ENST00000409766 A0A0J9YVX5 310 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 TRBV4-1A0A0J9YWV2 114 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 EMC8O43402 210 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 RGS10O43665 173 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 GASTP01350 101 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 CHRM4P08173 479 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 PRR5P85299 388 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 COMTD1Q86VU5 262 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 TAGAPQ8N103 731 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 FRMD1Q8N878 549 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 OR9A2Q8NGT5 310 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 BBS10Q8TAM1 723 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 IPCEF1Q8WWN9 437 aaPredicted RBP18.95■□□□□ 0.62
USP39-204ENST00000409766 GTPBP3Q969Y2 492 aaKnown RBP18.95■□□□□ 0.62
USP39-204ENST00000409766 C16orf58Q96GQ5 468 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 POT1Q9NUX5 634 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 KCMF1Q9P0J7 381 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 WARS2Q9UGM6 360 aaKnown RBP18.95■□□□□ 0.62
USP39-204ENST00000409766 ACAD8Q9UKU7 415 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 CYP8B1Q9UNU6 501 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 KLK4Q9Y5K2 254 aa18.95■□□□□ 0.62
USP39-204ENST00000409766 MT-ND2P03891 347 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms