RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 SLC12A4Q9UP95 1085 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 NBPF19A0A087WUL8 3843 aa13.43□□□□□ -0.26
NIF3L1-205ENST00000409588 A0A1B0GVC2 190 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 C2orf92A0A1B0GVN3 265 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 SERTM1A2A2V5 107 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 GLOD5A6NK44 160 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 TP53I11O14683 189 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 BCKDKO14874 412 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 PGRMC2O15173 223 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 CDH16O75309 829 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 PDYNP01213 254 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 IGHG3P01860 377 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 ENO1P06733 434 aaKnown RBP13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 NAGAP17050 411 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 CSNK2A2P19784 350 aaPredicted RBP13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 PTGER1P34995 402 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 DEKP35659 375 aaKnown RBP13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 GSTM5P46439 218 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 CCT5P48643 541 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 TMED10P49755 219 aaKnown RBP13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 PRKAA2P54646 552 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 CDH13P55290 713 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 PKNOX1P55347 436 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 NRG3P56975 720 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 ERVK-8P63133 956 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 RPP38P78345 283 aaKnown RBP13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 ADORA2A-AS1P86434 159 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 ACAD11Q709F0 780 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 GALNT12Q8IXK2 581 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 FAM109AQ8N4B1 249 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 OR52N2Q8NGI0 321 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 L3HYPDHQ96EM0 354 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 DMRTA2Q96SC8 542 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 MRPL1Q9BYD6 325 aaKnown RBP13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 WWTR1Q9GZV5 400 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 ERVK-19Q9WJR5 959 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 PCDHGB3Q9Y5G1 929 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 PCDHA9Q9Y5H5 950 aa13.42□□□□□ -0.26
NIF3L1-205ENST00000409588 DLX3O60479 287 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 CDC40O60508 579 aaKnown RBP eCLIP13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 HCN1O60741 890 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 TPOP07202 933 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 RHOXF2BP0C7M4 288 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 CPMP14384 443 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 DRD2P14416 443 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 PSPHP78330 225 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 GTF3C1Q12789 2109 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 MAP4K2Q12851 820 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 LCP2Q13094 533 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 EBPQ15125 230 aaKnown RBP13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 NTRK2Q16620 822 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 CCDC153Q494R4 210 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 UNC50Q53HI1 259 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 SGO1Q5FBB7 561 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 SLC48A1Q6P1K1 146 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 LETMD1Q6P1Q0 360 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 DGAT2L6Q6ZPD8 337 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 COMMD6Q7Z4G1 85 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 FGD2Q7Z6J4 655 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 FBXW8Q8N3Y1 598 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 METTL6Q8TCB7 284 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 CA5BP1Q8WTZ4 195 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 CHTF18Q8WVB6 975 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 ASB5Q8WWX0 329 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 SARAFQ96BY9 339 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 ERP27Q96DN0 273 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 RHOXF2Q9BQY4 288 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 OR10A5Q9H207 317 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 ZFP64Q9NPA5 681 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 CES1P1Q9UKY3 287 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 GRID1Q9ULK0 1009 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 BOKQ9UMX3 212 aaPredicted RBP13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 WBP11Q9Y2W2 641 aaKnown RBP13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 ZNF780BQ9Y6R6 833 aa13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.41□□□□□ -0.26
NIF3L1-205ENST00000409588 FAM47E-STBD1D6RA91 191 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 MANBAO00462 879 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 ADAM10O14672 748 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 BCAS2O75934 225 aaPredicted RBP13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 SNX4O95219 450 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 NADKO95544 446 aaPredicted RBP13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 ESRRBO95718 433 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 GBAP04062 536 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 ATP1B1P05026 303 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 RFC3P40938 356 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 DCAF7P61962 342 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 HSF1Q00613 529 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 GALNT1Q10472 559 aaPredicted RBP13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 FOXO1Q12778 655 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 GXYLT1Q4G148 440 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 SPIN4Q56A73 249 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 LYPD8Q6UX82 237 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 GPRIN3Q6ZVF9 776 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 TDRPQ86YL5 185 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 ZNF441Q8N8Z8 693 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 TM4SF18Q96CE8 201 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 DEFB127Q9H1M4 99 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 ACKR4Q9NPB9 350 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 SIRT5Q9NXA8 310 aa13.4□□□□□ -0.26
NIF3L1-205ENST00000409588 TEX10Q9NXF1 929 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms