RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 TRIM15Q9C019 465 aa11.9□□□□□ -0.5
CHRNA1-205ENST00000409542 BRINP2Q9C0B6 783 aa11.9□□□□□ -0.5
CHRNA1-205ENST00000409542 MCCC2Q9HCC0 563 aa11.9□□□□□ -0.5
CHRNA1-205ENST00000409542 MKKSQ9NPJ1 570 aaPredicted RBP11.9□□□□□ -0.5
CHRNA1-205ENST00000409542 SLC52A3Q9NQ40 469 aa11.9□□□□□ -0.5
CHRNA1-205ENST00000409542 C14orf105Q9NVL8 296 aa11.9□□□□□ -0.5
CHRNA1-205ENST00000409542 CD274Q9NZQ7 290 aa11.9□□□□□ -0.5
CHRNA1-205ENST00000409542 GNPTGQ9UJJ9 305 aa11.9□□□□□ -0.5
CHRNA1-205ENST00000409542 NPIPA1Q9UND3 350 aa11.9□□□□□ -0.5
CHRNA1-205ENST00000409542 CDC14AQ9UNH5 594 aa11.9□□□□□ -0.5
CHRNA1-205ENST00000409542 AP4S1Q9Y587 144 aa11.9□□□□□ -0.5
CHRNA1-205ENST00000409542 PTGDR2Q9Y5Y4 395 aa11.9□□□□□ -0.5
CHRNA1-205ENST00000409542 DNHD1Q96M86 4753 aa11.9□□□□□ -0.51
CHRNA1-205ENST00000409542 A0A1B0GTL3 188 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 ANGPT2O15123 496 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 TCN1P20061 433 aaPredicted RBP11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 CMPK1P30085 196 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 CD96P40200 585 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 AGTR2P50052 363 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 CHN2P52757 468 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 EMP3P54852 163 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 ALDH6A1Q02252 535 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 BNIP2Q12982 314 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 RPS6KA2Q15349 733 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 TGFBIQ15582 683 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 ACER2Q5QJU3 275 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 H3F3CQ6NXT2 135 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 TTC23LQ6PF05 361 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 UGT2A3Q6UWM9 527 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 MEX3BQ6ZN04 569 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 FGD2Q7Z6J4 655 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 DHFR2Q86XF0 187 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 PLD3Q8IV08 490 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 SIAH3Q8IW03 269 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 HOMEZQ8IX15 550 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 SKA2Q8WVK7 121 aaPredicted RBP11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 MVB12AQ96EY5 273 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 VN1R1Q9GZP7 353 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 MUC13Q9H3R2 512 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 MRPS30Q9NP92 439 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 ZIM2Q9NZV7 527 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 ZNF225Q9UK10 706 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 A0A1W2PP18 115 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 ASPDHA6ND91 283 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 AQP12BA6NM10 295 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 FXYD1O00168 92 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 DNAJA2O60884 412 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 S100BP04271 92 aaPredicted RBP11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 C8orf89P0DMQ9 161 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 ERGP11308 486 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 ICAM2P13598 275 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 RGS4P49798 205 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 ERVK-8P63133 956 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 RCAN2Q14206 197 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 BTBD16Q32M84 506 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 RNFT1Q5M7Z0 435 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 IL23RQ5VWK5 629 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 FAM219BQ5XKK7 198 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 PTRHD1Q6GMV3 140 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 ZNF425Q6IV72 752 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 RNF165Q6ZSG1 346 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 PRSS41Q7RTY9 318 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 CPEB2Q7Z5Q1 589 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 DOLPP1Q86YN1 238 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 AQP12AQ8IXF9 295 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 SNX31Q8N9S9 440 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 PDPRQ8NCN5 879 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 CHTF18Q8WVB6 975 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 ATP6V1E2Q96A05 226 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 SCMH1Q96GD3 660 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 FRMD6Q96NE9 622 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 DMRTA2Q96SC8 542 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 TREX2Q9BQ50 279 aaPredicted RBP11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 TRIM54Q9BYV2 358 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 PCDHAC1Q9H158 963 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 GIMAP2Q9UG22 337 aa11.89□□□□□ -0.51
CHRNA1-205ENST00000409542 NIPBLQ6KC79 2804 aaeCLIP11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 SCN3AQ9NY46 2000 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 C15orf38-AP3S2A0A0A6YYH1 394 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 NCF1BA6NI72 391 aaPredicted RBP11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 NCF1CA8MVU1 366 aaPredicted RBP11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 ARHGEF33A8MVX0 844 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 NME4O00746 187 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 TXNDC9O14530 226 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 EEDO75530 441 aaKnown RBP11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 ANXA5P08758 320 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 ZCCHC18P0CG32 403 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 NCF1P14598 390 aaPredicted RBP11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 OR1C1Q15619 314 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 VPS26BQ4G0F5 336 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 KRTCAP3Q53RY4 240 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 PLAG1Q6DJT9 500 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 LCN8Q6JVE9 175 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 METTL2BQ6P1Q9 378 aaKnown RBP11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 SBSNQ6UWP8 590 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 FRA10AC1Q70Z53 315 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 GALNTL5Q7Z4T8 443 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 ARPINQ7Z6K5 226 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms