RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 MLC1Q15049 377 aa15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 TIGD2Q4W5G0 525 aa15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 C6orf163Q5TEZ5 329 aa15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 OR4F3Q6IEY1 312 aa15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 GK5Q6ZS86 529 aa15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 RP9Q8TA86 221 aaKnown RBP15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 TSLPQ969D9 159 aa15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 CMTM5Q96DZ9 223 aa15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 ADAP2Q9NPF8 381 aa15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 PCDHGB4Q9UN71 923 aa15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 KCNMB2Q9Y691 235 aa15.45■□□□□ 0.06
TSPAN4-208ENST00000409531 A0A1W2PP18 115 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 A0A1W2PRB8 838 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 OR2W5A6NFC9 320 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 BBIP1A8MTZ0 92 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 ANGPT2O15123 496 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 SLITRK5O94991 958 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 ATP1B1P05026 303 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 UMODP07911 640 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 FAM87AP0C7U9 286 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 MMP11P24347 488 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 PRDX6P30041 224 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 NCBP2P52298 156 aaKnown RBP eCLIP15.44■□□□□ 0.065e-7■■■■□ 24.3
TSPAN4-208ENST00000409531 DGKQP52824 942 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 OR4D2P58180 307 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 STX5Q13190 355 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 CYLC2Q14093 348 aaPredicted RBP15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 MAPKAPK3Q16644 382 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 CPZQ66K79 652 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 TMEM205Q6UW68 189 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 TRPM8Q7Z2W7 1104 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 RAB43Q86YS6 212 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 FITM2Q8N6M3 262 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 CIDECQ96AQ7 238 aaPredicted RBP15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 AMDHD1Q96NU7 426 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 ADNPQ9H2P0 1102 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 NEUROD4Q9HD90 331 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 BTNL2Q9UIR0 455 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 LEF1Q9UJU2 399 aaPredicted RBP15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 NDUFAF1Q9Y375 327 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 CLDN16Q9Y5I7 305 aa15.44■□□□□ 0.06
TSPAN4-208ENST00000409531 CAPN14A8MX76 684 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 TGFBR3LH3BV60 316 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 POLE2P56282 527 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 GABPB1Q06547 395 aaPredicted RBP15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 IL10RAQ13651 578 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 ELAVL1Q15717 326 aaKnown RBP15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 PRSS53Q2L4Q9 553 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 MPEG1Q2M385 716 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 MMEL1Q495T6 779 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 VPS26BQ4G0F5 336 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 FAM69BQ5VUD6 431 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 FAAH2Q6GMR7 532 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 FAM180BQ6P0A1 224 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 CPEB2Q7Z5Q1 589 aaKnown RBP15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 ANKRD37Q7Z713 158 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 CCDC116Q8IYX3 515 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 DNAJB8Q8NHS0 232 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 ADAMTS17Q8TE56 1095 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 NUDT8Q8WV74 236 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 OR5P2Q8WZ92 322 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 VPS33AQ96AX1 596 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 ITCHQ96J02 903 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 CCDC115Q96NT0 180 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 IP6K3Q96PC2 410 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 GLIPR2Q9H4G4 154 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 TUBD1Q9UJT1 453 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 MAN2B2Q9Y2E5 1009 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 LOC102723996A0A087X1L8 192 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 SCN2BO60939 215 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 PRB1P04280 392 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 IFI6P09912 130 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 COX4I1P13073 169 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 TNNI3P19429 210 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 CAPN3P20807 821 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 NT5EP21589 574 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 GPC1P35052 558 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 EFNA3P52797 238 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 WNT3P56703 355 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 FOXL2P58012 376 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 PHC1P78364 1004 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 HSPB3Q12988 150 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 KRT72Q14CN4 511 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 TERF2Q15554 542 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 ZNF750Q32MQ0 723 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 COQ5Q5HYK3 327 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 LANCL3Q6ZV70 420 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 SNX32Q86XE0 403 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 APLFQ8IW19 511 aaPredicted RBP15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 TMEM151BQ8IW70 566 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 OR14A16Q8NHC5 309 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 SUN3Q8TAQ9 357 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 ZNF675Q8TD23 568 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 DAZLQ92904 295 aaKnown RBP15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 RIT1Q92963 219 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 ART5Q96L15 291 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 SEMA4CQ9C0C4 833 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 SLAMF7Q9NQ25 335 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 SLC52A3Q9NQ40 469 aa15.43■□□□□ 0.06
TSPAN4-208ENST00000409531 PNO1Q9NRX1 252 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms