RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 ZNF284Q2VY69 593 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 CYP27C1Q4G0S4 372 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 USP39Q53GS9 565 aaKnown RBP10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 FAM209BQ5JX69 171 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 PDSS1Q5T2R2 415 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 FAM219BQ5XKK7 198 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 ELP2Q6IA86 826 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 C3P1Q6ZMU1 363 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 LAS2Q8IYD9 372 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 TMIEQ8NEW7 156 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 SCARB1Q8WTV0 552 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 EXT2Q93063 718 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 PHF21AQ96BD5 680 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 ZNF419Q96HQ0 510 aaPredicted RBP10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 C10orf90Q96M02 699 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 UROC1Q96N76 676 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 KATNB1Q9BVA0 655 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 RNF32Q9H0A6 362 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 AMBNQ9NP70 447 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 EQTNQ9NQ60 294 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 GPRC5BQ9NZH0 403 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 MARCH4Q9P2E8 410 aaPredicted RBP10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 DUX4Q9UBX2 424 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 FTSJ1Q9UET6 329 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 RPL36Q9Y3U8 105 aaKnown RBP10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 COMMD10Q9Y6G5 202 aa10.11□□□□□ -0.79
NIF3L1-204ENST00000409357 PRAMEF33A0A0G2JMD5 474 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 IRGMA1A4Y4 181 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 ANKDD1BA6NHY2 528 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 TNFRSF11BO00300 401 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 LDB2O43679 373 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 SLC28A2O43868 658 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 PRMT3O60678 531 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 PRAMEF10O60809 474 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 SOX30O94993 753 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 CFDP00746 253 aaPredicted RBP10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 EPOP01588 193 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 ADRB1P08588 477 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 NMBP08949 121 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 S100A3P33764 101 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 OR1D2P34982 312 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 GSTM5P46439 218 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 STC1P52823 247 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 NUDT6P53370 316 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 PITX1P78337 314 aaPredicted RBP10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 CSTF1Q05048 431 aaKnown RBP10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 MTAPQ13126 283 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 OPCMLQ14982 345 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 SNAPC1Q16533 368 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 TMEM31Q5JXX7 168 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 QSOX2Q6ZRP7 698 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 TMEM151BQ8IW70 566 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 PHACTR4Q8IZ21 702 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 RYBPQ8N488 228 aaPredicted RBP10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 KREMEN2Q8NCW0 462 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 OTULINQ96BN8 352 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 SGK3Q96BR1 496 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 POLR2J2Q9GZM3 115 aaKnown RBP10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 DPAGT1Q9H3H5 408 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 SAV1Q9H4B6 383 aaPredicted RBP10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 TMPRSS4Q9NRS4 437 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 MRPS18AQ9NVS2 196 aaKnown RBP10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 HCN3Q9P1Z3 774 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 CTSFQ9UBX1 484 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 OR12D3Q9UGF7 316 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 TINAGQ9UJW2 476 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 FRYLO94915 3013 aa10.1□□□□□ -0.79
NIF3L1-204ENST00000409357 A0A0B4J203 849 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 LOC102723532A0A0G2JNH3 316 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 TRDV1A0A1B0GX56 115 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 I6L893 689 aaPredicted RBP10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 J3KR12 359 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 GPR171O14626 319 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 LZTS3O60299 673 aaPredicted RBP10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 GPR37L1O60883 481 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 RPP40O75818 363 aaKnown RBP10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 HLA-DQB2P05538 268 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 SMIM6P0DI80 62 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 PPIBP23284 216 aaKnown RBP10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 LCN1P31025 176 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 CHRNA4P43681 627 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 BDKRB1P46663 353 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 LIMS1P48059 325 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 RFX3P48380 749 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 IDH2P48735 452 aaKnown RBP10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 NRG1Q02297 640 aaPredicted RBP10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 IL10RBQ08334 325 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 MPEG1Q2M385 716 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 ATAT1Q5SQI0 421 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 OVOS1Q6IE37 1185 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 BHLHB9Q6PI77 547 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 FIP1L1Q6UN15 594 aaKnown RBP10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 FAM198BQ6UWH4 519 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 HFE2Q6ZVN8 426 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 PGAP1Q75T13 922 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 SHFQ7M4L6 423 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 KIAA0907Q7Z7F0 614 aaPredicted RBP10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 GPSM1Q86YR5 675 aa10.09□□□□□ -0.79
NIF3L1-204ENST00000409357 CCDC36Q8IYA8 594 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms