RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 SERPINB4P48594 390 aa16.62■□□□□ 0.25
PDLIM2-206ENST00000409141 MPEG1Q2M385 716 aa16.62■□□□□ 0.25
PDLIM2-206ENST00000409141 PIGGQ5H8A4 983 aa16.62■□□□□ 0.25
PDLIM2-206ENST00000409141 FAM180BQ6P0A1 224 aa16.62■□□□□ 0.25
PDLIM2-206ENST00000409141 MDGA2Q7Z553 956 aa16.62■□□□□ 0.25
PDLIM2-206ENST00000409141 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.62■□□□□ 0.25
PDLIM2-206ENST00000409141 GPALPP1Q8IXQ4 340 aa16.62■□□□□ 0.25
PDLIM2-206ENST00000409141 CDC26Q8NHZ8 85 aa16.62■□□□□ 0.25
PDLIM2-206ENST00000409141 FAM76AQ8TAV0 307 aa16.62■□□□□ 0.25
PDLIM2-206ENST00000409141 AGR3Q8TD06 166 aa16.62■□□□□ 0.25
PDLIM2-206ENST00000409141 PKNOX2Q96KN3 472 aa16.62■□□□□ 0.25
PDLIM2-206ENST00000409141 GAL3ST4Q96RP7 486 aa16.62■□□□□ 0.25
PDLIM2-206ENST00000409141 STMN4Q9H169 189 aaPredicted RBP16.62■□□□□ 0.25
PDLIM2-206ENST00000409141 TIMMDC1Q9NPL8 285 aa16.62■□□□□ 0.25
PDLIM2-206ENST00000409141 PFDN4Q9NQP4 134 aa16.62■□□□□ 0.25
PDLIM2-206ENST00000409141 POLR3HQ9Y535 204 aaPredicted RBP16.62■□□□□ 0.25
PDLIM2-206ENST00000409141 DNAJC15Q9Y5T4 150 aa16.62■□□□□ 0.25
PDLIM2-206ENST00000409141 OR6C76A6NM76 312 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 TMEM233B4DJY2 109 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 ZNF763Q0D2J5 394 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 C2orf80Q0P641 193 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 FUT7Q11130 342 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 SH2D4BQ5SQS7 431 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 FHL5Q5TD97 284 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 NOXRED1Q6NXP6 359 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 OPN5Q6U736 354 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 Q6ZSR9 355 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 DDIASQ8IXT1 998 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 EXOSC8Q96B26 276 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 CNRIP1Q96F85 164 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 METTL2AQ96IZ6 378 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 BRINP2Q9C0B6 783 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 TUBB1Q9H4B7 451 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 LRTM1Q9HBL6 345 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 C1orf109Q9NX04 203 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 KLF13Q9Y2Y9 288 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 SVILO95425 2214 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 KLRC4-KLRK1H3BQV0 150 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 BIRC5O15392 142 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 ZWINTO95229 277 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 CLPSP04118 112 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 ATP1B1P05026 303 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 NEFHP12036 1026 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 PRPH2P23942 346 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 MST1P26927 711 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 MAP4K2Q12851 820 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 UBAP2LQ14157 1087 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 UGT3A2Q3SY77 523 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 HLA-DQA1Q5Y7H0 255 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 RNF165Q6ZSG1 346 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 CCDC116Q8IYX3 515 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 SAMD14Q8IZD0 417 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 LRRC25Q8N386 305 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 FAM26EQ8N5C1 309 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 ADCY4Q8NFM4 1077 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 OR6Y1Q8NGX8 325 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 SLC22A8Q8TCC7 542 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 TWIST2Q8WVJ9 160 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 ZNF681Q96N22 645 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 WWTR1Q9GZV5 400 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 OR10A5Q9H207 317 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 GIMAP4Q9NUV9 329 aa16.61■□□□□ 0.25
PDLIM2-206ENST00000409141 C2orf92A0A1B0GVN3 265 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 ASPDHA6ND91 283 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 PEX1O43933 1283 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 ZNF354AO60765 605 aaPredicted RBP16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 DDCP20711 480 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 ARRB2P32121 409 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 PTGER1P34995 402 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 TDGF1P3P51864 188 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 ALDH6A1Q02252 535 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 DUSP2Q05923 314 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 MPP2Q14168 576 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 KIAA0040Q15053 153 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 EBPQ15125 230 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 PRICKLE4Q2TBC4 344 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 FAM111BQ6SJ93 734 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 SULF2Q8IWU5 870 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 VWA5B2Q8N398 1253 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 CPSF7Q8N684 471 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 SLC15A4Q8N697 577 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 ZNF615Q8N8J6 731 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 OR7G1Q8NGA0 311 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 OR2T11Q8NH01 316 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 MYNNQ9NPC7 610 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 SLC35C2Q9NQQ7 365 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 EHD3Q9NZN3 535 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 BCAP29Q9UHQ4 241 aa16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 WBP11Q9Y2W2 641 aaKnown RBP16.6■□□□□ 0.25
PDLIM2-206ENST00000409141 LRRK2Q5S007 2527 aa16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 NPIPB8E9PQR5 432 aa16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 PIP5K1BO14986 540 aa16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 SERPINE1P05121 402 aa16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 S1PR1P21453 382 aa16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 MEOX1P50221 254 aa16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 SRSF1Q07955 248 aaKnown RBP eCLIP16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 MGAT2Q10469 447 aa16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 CHI3L2Q15782 390 aa16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 FAM71E1Q6IPT2 247 aa16.59■□□□□ 0.25
PDLIM2-206ENST00000409141 GFRALQ6UXV0 394 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms