RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 DBF4BQ8NFT6 615 aa4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 OR7A2PQ8NGA2 310 aa4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 OR1L3Q8NH93 324 aa4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 PIK3R3Q92569 461 aa4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 SEPT8Q92599 483 aa4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 TAF4BQ92750 862 aa4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 RIT1Q92963 219 aa4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 CCDC127Q96BQ5 260 aa4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 PGM2Q96G03 612 aa4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 ANKRD36BP1Q96IX9 119 aa4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 C10orf90Q96M02 699 aa4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 KLHL5Q96PQ7 755 aa4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 TRIM6Q9C030 488 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 TMEM117Q9H0C3 514 aa4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 RIMS4Q9H426 269 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 FAM124BQ9H5Z6 455 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 PPANQ9NQ55 473 aaKnown RBP4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 RGS18Q9NS28 235 aa4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 PKD2L2Q9NZM6 624 aa4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 UBQLN1Q9UMX0 589 aaKnown RBP4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 MRPS28Q9Y2Q9 187 aaKnown RBP4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 TSC2P49815 1807 aa4.35□□□□□ -1.71
HMGB3P19-201ENST00000403971 ZNF638Q14966 1978 aaKnown RBP4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 A0A087WW49 117 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 A0A087X002 238 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 PRSS46E5RG02 174 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 F8VVB4 439 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 F8VWA3 439 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 H0Y626 953 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 O00370 1275 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 SLC7A4O43246 635 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 ZG16O60844 167 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 SLU7O95391 586 aaKnown RBP4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 TGDSO95455 350 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 ASS1P00966 412 aaKnown RBP4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 TNNC2P02585 160 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 TPM1P09493 284 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 ANKRD34CP0C6C1 535 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 TRIM49P0CI25 452 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 TRIM49CP0CI26 452 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 CXCL8P10145 99 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 DLATP10515 647 aaKnown RBP4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 F3P13726 295 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 HNRNPH3P31942 346 aaKnown RBP4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 TNNT3P45378 269 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 GCLMP48507 274 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 DNA2P51530 1060 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 MYL7Q01449 175 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 CACNG1Q06432 222 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 TMEM132DQ14C87 1099 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 SGSM1Q2NKQ1 1148 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 PDLIM3Q53GG5 364 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 C1QTNF12Q5T7M4 302 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 PWWP2BQ6NUJ5 590 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 Q6ZSR9 355 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 PTAR1Q7Z6K3 402 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 AMIGO1Q86WK6 493 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 ECHDC2Q86YB7 292 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 KLHL7Q8IXQ5 586 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 EFCAB13Q8IY85 973 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 MARVELD2Q8N4S9 558 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 LRRC52Q8N7C0 313 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 CCDC63Q8NA47 563 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 NHLRC2Q8NBF2 726 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 UXS1Q8NBZ7 420 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 SLC37A3Q8NCC5 494 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 DDHD1Q8NEL9 900 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 ZNF397Q8NF99 534 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 NEK11Q8NG66 645 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 GDAP1L1Q96MZ0 367 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 NECTIN4Q96NY8 510 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 DESI2Q9BSY9 194 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 PI4K2AQ9BTU6 479 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 NXF3Q9H4D5 531 aaKnown RBP4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 TXLNGQ9NUQ3 528 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 RAB20Q9NX57 234 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 TMEM161AQ9NX61 479 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 OR6C2Q9NZP2 312 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 GCNT4Q9P109 453 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 C19orf25Q9UFG5 118 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 RASAL2Q9UJF2 1139 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 ITGA11Q9UKX5 1188 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 ANGPTL3Q9Y5C1 460 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 GREB1Q4ZG55 1949 aa4.34□□□□□ -1.71
HMGB3P19-201ENST00000403971 COL4A6Q14031 1691 aa4.33□□□□□ -1.72
HMGB3P19-201ENST00000403971 PTPRJQ12913 1337 aa4.33□□□□□ -1.72
HMGB3P19-201ENST00000403971 UMODL1Q5DID0 1318 aa4.33□□□□□ -1.72
HMGB3P19-201ENST00000403971 SMIM28A0A1B0GU29 152 aa4.33□□□□□ -1.72
HMGB3P19-201ENST00000403971 C2CD4DB7Z1M9 353 aa4.33□□□□□ -1.72
HMGB3P19-201ENST00000403971 H0YAE9 185 aa4.33□□□□□ -1.72
HMGB3P19-201ENST00000403971 PIRO00625 290 aa4.33□□□□□ -1.72
HMGB3P19-201ENST00000403971 FLRT2O43155 660 aa4.33□□□□□ -1.72
HMGB3P19-201ENST00000403971 SOCS5O75159 536 aa4.33□□□□□ -1.72
HMGB3P19-201ENST00000403971 NOL4O94818 638 aa4.33□□□□□ -1.72
HMGB3P19-201ENST00000403971 SEC24AO95486 1093 aa4.33□□□□□ -1.72
HMGB3P19-201ENST00000403971 HLA-DRAP01903 254 aa4.33□□□□□ -1.72
HMGB3P19-201ENST00000403971 RLN1P04808 185 aa4.33□□□□□ -1.72
HMGB3P19-201ENST00000403971 GYPCP04921 128 aa4.33□□□□□ -1.72
HMGB3P19-201ENST00000403971 CCDC172P0C7W6 258 aa4.33□□□□□ -1.72
HMGB3P19-201ENST00000403971 UCHL3P15374 230 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms