RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	SLC16A8	O95907	504 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	HOXD4	P09016	255 aa	Predicted RBP	6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	SLC35G6	P0C7Q6	338 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ERG	P11308	486 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	IL1RN	P18510	177 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ZFP36	P26651	326 aa	Known RBP	6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	FMO4	P31512	558 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PTGER1	P34995	402 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	DGKQ	P52824	942 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	IST1	P53990	364 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	SLC26A5	P58743	744 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	MXRA7	P84157	204 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	MPP1	Q00013	466 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	TAP2	Q03519	686 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PIGF	Q07326	219 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ZNF844	Q08AG5	666 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	GALE	Q14376	348 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	HABP2	Q14520	560 aa	Predicted RBP	6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	HERC3	Q15034	1050 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	CNN3	Q15417	329 aa	Known RBP	6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	TAOK1	Q7L7X3	1001 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	SYCE1	Q8N0S2	351 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	MMP21	Q8N119	569 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	TXLNB	Q8N3L3	684 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	TBC1D19	Q8N5T2	526 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	CPSF7	Q8N684	471 aa	Known RBP	6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PDPR	Q8NCN5	879 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	FAM156A	Q8NDB6	213 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	FAM136A	Q96C01	138 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	LRRC46	Q96FV0	321 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	RMND5B	Q96G75	393 aa	Predicted RBP	6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PRAP1	Q96NZ9	151 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PKP4	Q99569	1192 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ZNF747	Q9BV97	191 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	IL22	Q9GZX6	179 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	VPS11	Q9H270	941 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	CCDC68	Q9H2F9	335 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	CDCP1	Q9H5V8	836 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ZMAT3	Q9HA38	289 aa	Known RBP	6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	GPRC5B	Q9NZH0	403 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	BFAR	Q9NZS9	450 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	MARCH4	Q9P2E8	410 aa	Predicted RBP	6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	KCNE5	Q9UJ90	142 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	RNF6	Q9Y252	685 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	DRG1	Q9Y295	367 aa	Known RBP	6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	R3HDM2	Q9Y2K5	976 aa	Known RBP	6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	PIKFYVE	Q9Y2I7	2098 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	ITPR3	Q14573	2671 aa		6.28	□□□□□ -1.4
CEACAM1-208	ENST00000403461	SEC16A	O15027	2179 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	KCNE1B	A0A087WTH5	132 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	IGKV1-8	A0A0C4DH67	115 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CCDC189	A1A4V9	331 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	KRT87P	A6NCN2	255 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SGK494	L7N484	410 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PSMD12	O00232	456 aa	Predicted RBP	6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PEX1	O43933	1283 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	HS6ST1	O60243	411 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	RDH16	O75452	317 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PSIP1	O75475	530 aa	Known RBP	6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CDC123	O75794	336 aa	Predicted RBP	6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	WISP2	O76076	250 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TOX	O94900	526 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	APRT	P07741	180 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	FH	P07954	510 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ENO3	P13929	434 aa	Predicted RBP	6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	RHCE	P18577	417 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	KLK2	P20151	261 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	DNASE1	P24855	282 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	HLCS	P50747	726 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ITGA8	P53708	1063 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ADAR	P55265	1226 aa	Known RBP	6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	MLF1	P58340	268 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	POU6F2	P78424	691 aa	Predicted RBP	6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PLGLB1	Q02325	96 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	KLHL38	Q2WGJ6	581 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SPDYE7P	Q495Y7	208 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CTSL3P	Q5NE16	218 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	RNF220	Q5VTB9	566 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	RGS9BP	Q6ZS82	235 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PEX26	Q7Z412	305 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CAMKMT	Q7Z624	323 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ASPG	Q86U10	573 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PLD3	Q8IV08	490 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TMEM156	Q8N614	296 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	PPFIBP2	Q8ND30	876 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CPEB3	Q8NE35	698 aa	Known RBP	6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	OR10Q1	Q8NGQ4	319 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	GOT1L1	Q8NHS2	421 aa	Predicted RBP	6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ZCCHC10	Q8TBK6	192 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CREB3L4	Q8TEY5	395 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	SLC13A3	Q8WWT9	602 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	TBC1D20	Q96BZ9	403 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	BOD1	Q96IK1	185 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	ZNF778	Q96MU6	729 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	POLDIP3	Q9BY77	421 aa	Known RBP	6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	DEFB126	Q9BYW3	111 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	UCK2	Q9BZX2	261 aa		6.27	□□□□□ -1.41
CEACAM1-208	ENST00000403461	CXXC4	Q9H2H0	198 aa		6.27	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms