RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 TEX9Q8N6V9 391 aa11.38□□□□□ -0.59
PRAME-204ENST00000403441 PTGR2Q8N8N7 351 aaPredicted RBP11.38□□□□□ -0.59
PRAME-204ENST00000403441 UBE2E3Q969T4 207 aa11.38□□□□□ -0.59
PRAME-204ENST00000403441 ART5Q96L15 291 aa11.38□□□□□ -0.59
PRAME-204ENST00000403441 DGAT2Q96PD7 388 aa11.38□□□□□ -0.59
PRAME-204ENST00000403441 GPATCH1Q9BRR8 931 aaKnown RBP11.38□□□□□ -0.59
PRAME-204ENST00000403441 TBCDQ9BTW9 1192 aa11.38□□□□□ -0.59
PRAME-204ENST00000403441 NTMT1Q9BV86 223 aa11.38□□□□□ -0.59
PRAME-204ENST00000403441 CNPPD1Q9BV87 410 aa11.38□□□□□ -0.59
PRAME-204ENST00000403441 ZNF703Q9H7S9 590 aaPredicted RBP11.38□□□□□ -0.59
PRAME-204ENST00000403441 PRDM7Q9NQW5 492 aa11.38□□□□□ -0.59
PRAME-204ENST00000403441 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.38□□□□□ -0.59
PRAME-204ENST00000403441 PSD3Q9NYI0 1048 aa11.38□□□□□ -0.59
PRAME-204ENST00000403441 TMEM216Q9P0N5 145 aa11.38□□□□□ -0.59
PRAME-204ENST00000403441 PCTPQ9UKL6 214 aa11.38□□□□□ -0.59
PRAME-204ENST00000403441 ACANP16112 2415 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 ABCA2Q9BZC7 2435 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 HSPB2A8KAH6 182 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 A8MT66 165 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 OR7A17O14581 309 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 DVL2O14641 736 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 ETHE1O95571 254 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 NUDT17P0C025 328 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 ATP5A1P25705 553 aaKnown RBP11.37□□□□□ -0.59
PRAME-204ENST00000403441 HSD17B3P37058 310 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 PIGAP37287 484 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 PIK3CBP42338 1070 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 SSR2P43308 183 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 STT3AP46977 705 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 PLIN5Q00G26 463 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 ID2Q02363 134 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 ASPHQ12797 758 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 HSPB2Q16082 182 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 AP5B1Q2VPB7 878 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 ZNF791Q3KP31 576 aaPredicted RBP11.37□□□□□ -0.59
PRAME-204ENST00000403441 GGTA1PQ4G0N0 100 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 TMEM35AQ53FP2 167 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 PIGGQ5H8A4 983 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 MED27Q6P2C8 311 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 DND1Q8IYX4 353 aaKnown RBP11.37□□□□□ -0.59
PRAME-204ENST00000403441 LIX1Q8N485 282 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 SLC15A4Q8N697 577 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 ACOT4Q8N9L9 421 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 FAM13CQ8NE31 585 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 GOT1L1Q8NHS2 421 aaPredicted RBP11.37□□□□□ -0.59
PRAME-204ENST00000403441 NUBPLQ8TB37 319 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 WDR20Q8TBZ3 569 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 ZNF721Q8TF20 911 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 ZNF483Q8TF39 744 aaPredicted RBP11.37□□□□□ -0.59
PRAME-204ENST00000403441 CAVIN3Q969G5 261 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 SPACA9Q96E40 222 aaPredicted RBP11.37□□□□□ -0.59
PRAME-204ENST00000403441 MAPKAP1Q9BPZ7 522 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 ZFP64Q9NPA5 681 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 SEMA4BQ9NPR2 832 aaPredicted RBP11.37□□□□□ -0.59
PRAME-204ENST00000403441 RASSF1Q9NS23 344 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 CRIM1Q9NZV1 1036 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 CPSF2Q9P2I0 782 aaKnown RBP11.37□□□□□ -0.59
PRAME-204ENST00000403441 SPRR3Q9UBC9 169 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 ADGRE2Q9UHX3 823 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 PCDHGB3Q9Y5G1 929 aa11.37□□□□□ -0.59
PRAME-204ENST00000403441 PRRC2AP48634 2157 aaKnown RBP11.36□□□□□ -0.59
PRAME-204ENST00000403441 ZNF354AO60765 605 aaPredicted RBP11.36□□□□□ -0.59
PRAME-204ENST00000403441 SMIM24O75264 130 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 DRD2P14416 443 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 ENDOUP21128 410 aaKnown RBP11.36□□□□□ -0.59
PRAME-204ENST00000403441 HIST1H1TP22492 207 aaPredicted RBP11.36□□□□□ -0.59
PRAME-204ENST00000403441 CPN2P22792 545 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 ASCL1P50553 236 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 DGKQP52824 942 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 FLYWCH1Q4VC44 716 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 PRAMEF20Q5VT98 475 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 EMBQ6PCB8 327 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 ZNF793Q6ZN11 406 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 CHSY3Q70JA7 882 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 ULK2Q8IYT8 1036 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 OR52B6Q8NGF0 335 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 PAQR8Q8TEZ7 354 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 FAM222BQ8WU58 562 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 UBLCP1Q8WVY7 318 aaPredicted RBP11.36□□□□□ -0.59
PRAME-204ENST00000403441 ANKRD9Q96BM1 317 aaPredicted RBP11.36□□□□□ -0.59
PRAME-204ENST00000403441 RBM18Q96H35 190 aaKnown RBP11.36□□□□□ -0.59
PRAME-204ENST00000403441 SENP5Q96HI0 755 aaPredicted RBP11.36□□□□□ -0.59
PRAME-204ENST00000403441 JSRP1Q96MG2 331 aaPredicted RBP11.36□□□□□ -0.59
PRAME-204ENST00000403441 ALPK1Q96QP1 1244 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 ZNF717Q9BY31 904 aaPredicted RBP11.36□□□□□ -0.59
PRAME-204ENST00000403441 IPPKQ9H8X2 491 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 RYDENQ9NUL5 291 aaKnown RBP11.36□□□□□ -0.59
PRAME-204ENST00000403441 QPCTLQ9NXS2 382 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 CNIH4Q9P003 139 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 EMCNQ9ULC0 261 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 PLEKHA6Q9Y2H5 1048 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 PCDHGA11Q9Y5H2 935 aa11.36□□□□□ -0.59
PRAME-204ENST00000403441 FLNAP21333 2647 aaKnown RBP11.36□□□□□ -0.59
PRAME-204ENST00000403441 A0A1B0GTL3 188 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 A0A1W2PPM1 405 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 A6NNC1 897 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 FOXE1O00358 373 aaPredicted RBP11.35□□□□□ -0.59
PRAME-204ENST00000403441 SYT5O00445 386 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 FGF17O60258 216 aa11.35□□□□□ -0.59
PRAME-204ENST00000403441 CDH16O75309 829 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms