RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 TMEM220Q6QAJ8 160 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 NXPE4Q6UWF7 544 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 CLDN22Q8N7P3 220 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 SLC38A5Q8WUX1 472 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 SLC5A11Q8WWX8 675 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 TEFMQ96QE5 360 aaKnown RBP18.79■□□□□ 0.6
CCDC47-202ENST00000403162 SLC22A4Q9H015 551 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 TRPV4Q9HBA0 871 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 SEC14L5O43304 696 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 OR10H3O60404 316 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 BCHEP06276 602 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 H1F0P07305 194 aaKnown RBP18.79■□□□□ 0.6
CCDC47-202ENST00000403162 IGFBP1P08833 259 aaPredicted RBP18.79■□□□□ 0.6
CCDC47-202ENST00000403162 AZGP1P25311 298 aaKnown RBP18.79■□□□□ 0.6
CCDC47-202ENST00000403162 PBLDP30039 288 aaPredicted RBP18.79■□□□□ 0.6
CCDC47-202ENST00000403162 HEPACAMQ14CZ8 416 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 TBRG1Q3YBR2 411 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 TANGO2Q6ICL3 276 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 XKRXQ6PP77 449 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 WDR53Q7Z5U6 358 aaPredicted RBP18.79■□□□□ 0.6
CCDC47-202ENST00000403162 HORMAD2Q8N7B1 307 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 SIMC1Q8NDZ2 872 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 IRF7Q92985 503 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 OTUB2Q96DC9 234 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 CDX2Q99626 313 aaPredicted RBP18.79■□□□□ 0.6
CCDC47-202ENST00000403162 SPNS1Q9H2V7 528 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 TMEM245Q9H330 911 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 SPHK2Q9NRA0 654 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 C5orf42Q9H799 3197 aa18.79■□□□□ 0.6
CCDC47-202ENST00000403162 A6NL46 340 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 NEDD8-MDP1E9PL57 170 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 H3BN98 237 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 MYL12BO14950 172 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 LEFTY1O75610 366 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 FCARP24071 287 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 PGBD2Q6P3X8 592 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 LRRC56Q8IYG6 542 aaPredicted RBP18.78■□□□□ 0.6
CCDC47-202ENST00000403162 PSD4Q8NDX1 1056 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 FUZQ9BT04 418 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 POLR2J3Q9H1A7 115 aaKnown RBP18.78■□□□□ 0.6
CCDC47-202ENST00000403162 EPHX3Q9H6B9 360 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 RMI1Q9H9A7 625 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 TIGARQ9NQ88 270 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 ACAD8Q9UKU7 415 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 SNX7Q9UNH6 387 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 WWP2O00308 870 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 PDE9AO76083 593 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 OPRD1P41143 372 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 TSTA3Q13630 321 aaPredicted RBP18.78■□□□□ 0.6
CCDC47-202ENST00000403162 LY6G5CQ5SRR4 150 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 SLC25A30Q5SVS4 291 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 LIPKQ5VXJ0 399 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 DPPA4Q7L190 304 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 GALNT12Q8IXK2 581 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 MMP21Q8N119 569 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 FAM26EQ8N5C1 309 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 TCEANCQ8N8B7 351 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 OR9A1PQ8NGU1 263 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 UBE2E3Q969T4 207 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 TMEM19Q96HH6 336 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 PPP1R16AQ96I34 528 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 NECTIN4Q96NY8 510 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 DEPDC7Q96QD5 511 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 RSPO3Q9BXY4 272 aaPredicted RBP18.78■□□□□ 0.6
CCDC47-202ENST00000403162 NDEL1Q9GZM8 345 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 MIXL1Q9H2W2 232 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 TXNL4BQ9NX01 149 aaKnown RBP18.78■□□□□ 0.6
CCDC47-202ENST00000403162 HCN2Q9UL51 889 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 DIMT1Q9UNQ2 313 aaKnown RBP18.78■□□□□ 0.6
CCDC47-202ENST00000403162 TMEM98Q9Y2Y6 226 aa18.78■□□□□ 0.6
CCDC47-202ENST00000403162 CDRT1O95170 752 aa18.77■□□□□ 0.6
CCDC47-202ENST00000403162 LAMP2P13473 410 aa18.77■□□□□ 0.6
CCDC47-202ENST00000403162 GSTM5P46439 218 aa18.77■□□□□ 0.6
CCDC47-202ENST00000403162 TGM4P49221 684 aa18.77■□□□□ 0.6
CCDC47-202ENST00000403162 SMIM11AP58511 58 aa18.77■□□□□ 0.6
CCDC47-202ENST00000403162 MEF2AQ02078 507 aaPredicted RBP18.77■□□□□ 0.6
CCDC47-202ENST00000403162 ALDH6A1Q02252 535 aaKnown RBP18.77■□□□□ 0.6
CCDC47-202ENST00000403162 TAP2Q03519 686 aa18.77■□□□□ 0.6
CCDC47-202ENST00000403162 FAM131AQ6UXB0 335 aa18.77■□□□□ 0.6
CCDC47-202ENST00000403162 RDH10Q8IZV5 341 aa18.77■□□□□ 0.6
CCDC47-202ENST00000403162 GDPD1Q8N9F7 314 aa18.77■□□□□ 0.6
CCDC47-202ENST00000403162 CREB3L4Q8TEY5 395 aa18.77■□□□□ 0.6
CCDC47-202ENST00000403162 ZFYVE19Q96K21 471 aa18.77■□□□□ 0.6
CCDC47-202ENST00000403162 ZNF354BQ96LW1 612 aa18.77■□□□□ 0.6
CCDC47-202ENST00000403162 OBP2AQ9NY56 170 aa18.77■□□□□ 0.6
CCDC47-202ENST00000403162 NINQ8N4C6 2090 aa18.77■□□□□ 0.6
CCDC47-202ENST00000403162 TP53P04637 393 aaPredicted RBP18.76■□□□□ 0.59
CCDC47-202ENST00000403162 CPEP16870 476 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 SLAMF1Q13291 335 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 ARSIQ5FYB1 569 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 TNFAIP8L2Q6P589 184 aaPredicted RBP18.76■□□□□ 0.59
CCDC47-202ENST00000403162 PAQR6Q6TCH4 344 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 VASH1Q7L8A9 365 aaPredicted RBP18.76■□□□□ 0.59
CCDC47-202ENST00000403162 NANOGNBQ7Z5D8 188 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 OR5P2Q8WZ92 322 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 POLDIP3Q9BY77 421 aaKnown RBP18.76■□□□□ 0.59
CCDC47-202ENST00000403162 ABCB9Q9NP78 766 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 KLHL20Q9Y2M5 609 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 XIRP2A4UGR9 3374 aa18.76■□□□□ 0.59
CCDC47-202ENST00000403162 RAB36O95755 333 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms