RNA–Protein interactions for RNA: ENST00000402845.7

CACNA1C-221, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-221ENST00000402845 DCST2Q5T1A1 773 aa10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 PHC2Q8IXK0 858 aa10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 FAM71E2Q8N5Q1 922 aa10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 NIPA2Q8N8Q9 360 aa10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 ZNF784Q8NCA9 323 aaPredicted RBP10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 OR4K14Q8NGD5 310 aa10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 PGAM5Q96HS1 289 aa10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 PLEKHA3Q9HB20 300 aa10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 TMEM184CQ9NVA4 438 aa10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 SOX14O95416 240 aa10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 MTHFD2P13995 350 aa10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 SRP14P37108 136 aaKnown RBP10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 POLR2HP52434 150 aaKnown RBP10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 GNB2P62879 340 aa10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 PTGR1Q14914 329 aa10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 CNPY1Q3B7I2 92 aa10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 SLC10A6Q3KNW5 377 aa10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 SH3D19Q5HYK7 790 aa10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 KDELC1Q6UW63 502 aa10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 TMIGD1Q6UXZ0 262 aa10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 CDKN2AIPNLQ96HQ2 116 aa10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 APOBEC3GQ9HC16 384 aaKnown RBP10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 KLHL21Q9UJP4 597 aa10.59□□□□□ -0.71
CACNA1C-221ENST00000402845 DLDP09622 509 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 GTF2F2P13984 249 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 KCNQ1P51787 676 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 RRADP55042 308 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 LCTLQ6UWM7 567 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 OR4D6Q8NGJ1 314 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 DERL2Q9GZP9 239 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 MYNNQ9NPC7 610 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 AGPAT4Q9NRZ5 378 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 FLRT2O43155 660 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 EBLN1P0CF75 366 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 GLDCP23378 1020 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 RPA4Q13156 261 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 ANKDD1AQ495B1 522 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 VWA2Q5GFL6 755 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 KRBOX4Q5JUW0 171 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 SUSD1Q6UWL2 747 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 PRR18Q8N4B5 295 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 BORCS7Q96B45 105 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 GPRC5BQ9NZH0 403 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 HS3ST4Q9Y661 456 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 CAPN5O15484 640 aaPredicted RBP10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 PRICKLE3O43900 615 aaPredicted RBP10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 ERP29P30040 261 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 CST6Q15828 149 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 SLC35G1Q2M3R5 365 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 SOWAHAQ2M3V2 549 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 HACD2Q6Y1H2 254 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 ERI1Q8IV48 349 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 C3orf49Q96BT1 292 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 OR5B12Q96R08 314 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 HERC2P3Q9BVR0 1158 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 CD244Q9BZW8 370 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 SALL4Q9UJQ4 1053 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 J3KR12 359 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 ITM2AO43736 263 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 ATG12O94817 140 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 LATS1O95835 1130 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 UFM1P61960 85 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 KHDC1Q4VXA5 237 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 FBXL22Q6P050 247 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 SHISA6Q6ZSJ9 500 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 SLC6A7Q99884 636 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 BEX2Q9BXY8 128 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 RGCCQ9H4X1 137 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 BEX1Q9HBH7 125 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 AMBNQ9NP70 447 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 MAN2C1Q9NTJ4 1040 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 RNF11Q9Y3C5 154 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 WDR45Q9Y484 360 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 HHLA1C9JL84 531 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 NFKBIEO00221 500 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 C6P13671 934 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 RAC2P15153 192 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 AMY2BP19961 511 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 ACVRL1P37023 503 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 ADH7P40394 386 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 GSTM4Q03013 218 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 SLC18A2Q05940 514 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 TRIM73Q86UV7 250 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 PSD4Q8NDX1 1056 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 OR8K3Q8NH51 312 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 FBXL8Q96CD0 374 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 SUCNR1Q9BXA5 334 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 MFRPQ9BY79 579 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 ACTR6Q9GZN1 396 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 EIF5A2Q9GZV4 153 aaKnown RBP10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 NANOGQ9H9S0 305 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 KCNIP1Q9NZI2 227 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 SLC17A6Q9P2U8 582 aa10.58□□□□□ -0.72
CACNA1C-221ENST00000402845 PMM2O15305 246 aa10.57□□□□□ -0.72
CACNA1C-221ENST00000402845 CREG1O75629 220 aa10.57□□□□□ -0.72
CACNA1C-221ENST00000402845 GABRA3P34903 492 aa10.57□□□□□ -0.72
CACNA1C-221ENST00000402845 ZNF280AP59817 542 aaPredicted RBP10.57□□□□□ -0.72
CACNA1C-221ENST00000402845 STEAP3Q658P3 488 aa10.57□□□□□ -0.72
CACNA1C-221ENST00000402845 MFSD8Q8NHS3 518 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms