RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 SIX2Q9NPC8 291 aa13.29□□□□□ -0.28
RERE-204ENST00000400908 MRPS17Q9Y2R5 130 aaKnown RBP13.29□□□□□ -0.28
RERE-204ENST00000400908 AHDC1Q5TGY3 1603 aaPredicted RBP13.28□□□□□ -0.28
RERE-204ENST00000400908 GPR25O00155 361 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 CKMT1AP12532 417 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 GNSP15586 552 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 TAS2R31P59538 309 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 HTRA4P83105 476 aaPredicted RBP13.28□□□□□ -0.28
RERE-204ENST00000400908 ARL6IP1Q15041 203 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 TMEM35AQ53FP2 167 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 WDR45BQ5MNZ6 344 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 CMTM1Q8IZ96 169 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 OR2T33Q8NG76 320 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 OR2T35Q8NGX2 323 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 OR8K5Q8NH50 307 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 TMEM234Q8WY98 164 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 OR51E2Q9H255 320 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 RHCGQ9UBD6 479 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 FETUBQ9UGM5 382 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 CNOT11Q9UKZ1 510 aaKnown RBP13.28□□□□□ -0.28
RERE-204ENST00000400908 CHRNA1P02708 482 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 L1CAMP32004 1257 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 THBS3P49746 956 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 PDGFRLQ15198 375 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 SLC27A4Q6P1M0 643 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 ASRGL1Q7L266 308 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 SSX9Q7RTT3 188 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 TRUB1Q8WWH5 349 aaKnown RBP13.28□□□□□ -0.28
RERE-204ENST00000400908 MSI2Q96DH6 328 aaKnown RBP13.28□□□□□ -0.28
RERE-204ENST00000400908 SLC28A3Q9HAS3 691 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 STUB1Q9UNE7 303 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 C11orf98E9PRG8 122 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 KIAA0513O60268 411 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 CILPO75339 1184 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 SLC22A5O76082 557 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 TFP02787 698 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 MGST1P10620 155 aaKnown RBP13.28□□□□□ -0.28
RERE-204ENST00000400908 CD6P30203 668 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 NPAS3Q8IXF0 933 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 C1orf127Q8N9H9 656 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 OR1J4Q8NGS1 313 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 ITPKCQ96DU7 683 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 SCML2Q9UQR0 700 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 FBXO7Q9Y3I1 522 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.28□□□□□ -0.28
RERE-204ENST00000400908 TRBV2A0A0J9YWF9 115 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 A0A1W2PPV4 95 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 CD8B2A6NJW9 211 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 FADS1O60427 444 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 OXSR1O95747 527 aaPredicted RBP13.28□□□□□ -0.28
RERE-204ENST00000400908 CD8BP10966 210 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 SMPD1P17405 629 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 MAP2K4P45985 399 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 FLT3LGP49771 235 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 VSX2P58304 361 aaPredicted RBP13.28□□□□□ -0.28
RERE-204ENST00000400908 S100A7AQ86SG5 101 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 CHTF18Q8WVB6 975 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 NTAN1Q96AB6 310 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 TLE6Q9H808 572 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 SDHAF2Q9NX18 166 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 ERVK13-1Q9NX77 482 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 B3GNT2Q9NY97 397 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 NLKQ9UBE8 527 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 UNC119BA6NIH7 251 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 E7ESA3 106 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 H0YAE9 185 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 OR7A17O14581 309 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 DCNP07585 359 aaKnown RBP13.28□□□□□ -0.28
RERE-204ENST00000400908 PRPH2P23942 346 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 ELK4P28324 431 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 IRF9Q00978 393 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 ZNF169Q14929 603 aaPredicted RBP13.28□□□□□ -0.28
RERE-204ENST00000400908 LRRC57Q8N9N7 239 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 ANKK1Q8NFD2 765 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 DENND1AQ8TEH3 1009 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 UBXN10Q96LJ8 280 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 POU2F3Q9UKI9 436 aa13.28□□□□□ -0.28
RERE-204ENST00000400908 ZNF536O15090 1300 aa13.27□□□□□ -0.28
RERE-204ENST00000400908 CCDC85CA6NKD9 419 aa13.27□□□□□ -0.28
RERE-204ENST00000400908 HTRA2O43464 458 aaPredicted RBP13.27□□□□□ -0.28
RERE-204ENST00000400908 CAPN15O75808 1086 aa13.27□□□□□ -0.28
RERE-204ENST00000400908 KLK3P07288 261 aaPredicted RBP13.27□□□□□ -0.28
RERE-204ENST00000400908 NKX2-5P52952 324 aaPredicted RBP13.27□□□□□ -0.28
RERE-204ENST00000400908 HNRNPDQ14103 355 aaKnown RBP13.27□□□□□ -0.28
RERE-204ENST00000400908 GPR33Q49SQ1 333 aa13.27□□□□□ -0.28
RERE-204ENST00000400908 BCL2L15Q5TBC7 163 aa13.27□□□□□ -0.28
RERE-204ENST00000400908 SPRYD7Q5W111 196 aa13.27□□□□□ -0.28
RERE-204ENST00000400908 LRFN4Q6PJG9 635 aa13.27□□□□□ -0.28
RERE-204ENST00000400908 NELL2Q99435 816 aa13.27□□□□□ -0.28
RERE-204ENST00000400908 RAB9BQ9NP90 201 aa13.27□□□□□ -0.28
RERE-204ENST00000400908 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.27□□□□□ -0.28
RERE-204ENST00000400908 SMIM28A0A1B0GU29 152 aa13.27□□□□□ -0.28
RERE-204ENST00000400908 UBFD1O14562 309 aaKnown RBP13.27□□□□□ -0.28
RERE-204ENST00000400908 NPC1O15118 1278 aa13.27□□□□□ -0.28
RERE-204ENST00000400908 LAG3P18627 525 aa13.27□□□□□ -0.28
RERE-204ENST00000400908 CSNK2A1P68400 391 aaPredicted RBP13.27□□□□□ -0.28
RERE-204ENST00000400908 CSNK2A3Q8NEV1 391 aa13.27□□□□□ -0.28
RERE-204ENST00000400908 ZNF436Q9C0F3 470 aaPredicted RBP13.27□□□□□ -0.28
RERE-204ENST00000400908 WDR26Q9H7D7 661 aa13.27□□□□□ -0.28
RERE-204ENST00000400908 PATZ1Q9HBE1 687 aaKnown RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms