RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 FNDC1Q4ZHG4 1894 aaPredicted RBP16.22■□□□□ 0.19
PTPRA-205ENST00000399903 LINC00862A6NCI5 91 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 PRR23AA6NEV1 266 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 LGALS8O00214 317 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 SMAD6O43541 496 aaKnown RBP16.22■□□□□ 0.19
PTPRA-205ENST00000399903 LANCL1O43813 399 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 MPZL2O60487 215 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 C6orf47O95873 294 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 PROS1P07225 676 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 PPP3R1P63098 170 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 GPR176Q14439 515 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 GRK1Q15835 563 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 CXorf57Q6NSI4 855 aaKnown RBP16.22■□□□□ 0.19
PTPRA-205ENST00000399903 ZNF730Q6ZMV8 503 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 RASSF6Q6ZTQ3 369 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 FAM92BQ6ZTR7 304 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 LIX1LQ8IVB5 337 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 NPAS3Q8IXF0 933 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 NANOGP1Q8N7R0 232 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 ZNF366Q8N895 744 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 CSGALNACT1Q8TDX6 532 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 HHIPL1Q96JK4 782 aa16.22■□□□□ 0.19
PTPRA-205ENST00000399903 ZAR1LA6NP61 321 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 IFNW1P05000 195 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 HOXB9P17482 250 aaPredicted RBP16.21■□□□□ 0.19
PTPRA-205ENST00000399903 EPORP19235 508 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 CELP19835 753 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 KELP23276 732 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 DNASE1P24855 282 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 ITGB8P26012 769 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 ATP6V1E1P36543 226 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 CDH4P55283 916 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 GCNT6Q5T4J0 391 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 BICRALQ6AI39 1079 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 APCDD1Q8J025 514 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 OR11H7Q8NGC8 314 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 LHFPL5Q8TAF8 219 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 LRR1Q96L50 414 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 PSKH2Q96QS6 385 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 TMEM43Q9BTV4 400 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 P2RY12Q9H244 342 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 SAV1Q9H4B6 383 aaPredicted RBP16.21■□□□□ 0.19
PTPRA-205ENST00000399903 EYSQ5T1H1 3165 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 PLATP00750 562 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 FABP5Q01469 135 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 ADGRF1Q5T601 910 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 HS6ST3Q8IZP7 471 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 RBFAQ8N0V3 343 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 PGBD3Q8N328 593 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 OR4C15Q8NGM1 316 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 SLC9A6Q92581 669 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 EID2BQ96D98 161 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 TOE1Q96GM8 510 aaKnown RBP16.21■□□□□ 0.19
PTPRA-205ENST00000399903 MSLNLQ96KJ4 702 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 LINC00052Q96N35 136 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 MGME1Q9BQP7 344 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 MARVELD1Q9BSK0 173 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 PPA2Q9H2U2 334 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 CLCA2Q9UQC9 943 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 LSM2Q9Y333 95 aaKnown RBP16.21■□□□□ 0.19
PTPRA-205ENST00000399903 PCDHB1Q9Y5F3 818 aa16.21■□□□□ 0.19
PTPRA-205ENST00000399903 TMEM229AB2RXF0 380 aa16.21■□□□□ 0.18
PTPRA-205ENST00000399903 CKMP06732 381 aa16.21■□□□□ 0.18
PTPRA-205ENST00000399903 ANXA3P12429 323 aa16.21■□□□□ 0.18
PTPRA-205ENST00000399903 CD79BP40259 229 aa16.21■□□□□ 0.18
PTPRA-205ENST00000399903 CSKP41240 450 aa16.21■□□□□ 0.18
PTPRA-205ENST00000399903 STK19P49842 368 aaPredicted RBP16.21■□□□□ 0.18
PTPRA-205ENST00000399903 CDK6Q00534 326 aa16.21■□□□□ 0.18
PTPRA-205ENST00000399903 MLLT11Q13015 90 aaPredicted RBP16.21■□□□□ 0.18
PTPRA-205ENST00000399903 SF3A2Q15428 464 aaKnown RBP16.21■□□□□ 0.18
PTPRA-205ENST00000399903 TEAD4Q15561 434 aa16.21■□□□□ 0.18
PTPRA-205ENST00000399903 IER5LQ5T953 404 aa16.21■□□□□ 0.18
PTPRA-205ENST00000399903 CPA6Q8N4T0 437 aa16.21■□□□□ 0.18
PTPRA-205ENST00000399903 SMG7Q92540 1137 aaKnown RBP16.21■□□□□ 0.18
PTPRA-205ENST00000399903 RBPMSQ93062 196 aaKnown RBP16.21■□□□□ 0.18
PTPRA-205ENST00000399903 MAGEH1Q9H213 219 aa16.21■□□□□ 0.18
PTPRA-205ENST00000399903 KCNN2Q9H2S1 579 aa16.21■□□□□ 0.18
PTPRA-205ENST00000399903 PIGUQ9H490 435 aa16.21■□□□□ 0.18
PTPRA-205ENST00000399903 VPS29Q9UBQ0 182 aa16.21■□□□□ 0.18
PTPRA-205ENST00000399903 SCN2BO60939 215 aa16.2■□□□□ 0.18
PTPRA-205ENST00000399903 CD160O95971 181 aa16.2■□□□□ 0.18
PTPRA-205ENST00000399903 ITGALP20701 1170 aa16.2■□□□□ 0.18
PTPRA-205ENST00000399903 RHOAP61586 193 aa16.2■□□□□ 0.18
PTPRA-205ENST00000399903 MC1RQ01726 317 aa16.2■□□□□ 0.18
PTPRA-205ENST00000399903 CLDN22Q8N7P3 220 aa16.2■□□□□ 0.18
PTPRA-205ENST00000399903 NEIL3Q8TAT5 605 aa16.2■□□□□ 0.18
PTPRA-205ENST00000399903 CIDECQ96AQ7 238 aaPredicted RBP16.2■□□□□ 0.18
PTPRA-205ENST00000399903 AP2M1Q96CW1 435 aa16.2■□□□□ 0.18
PTPRA-205ENST00000399903 C12orf66Q96MD2 445 aa16.2■□□□□ 0.18
PTPRA-205ENST00000399903 FAM120CQ9NX05 1096 aaKnown RBP16.2■□□□□ 0.18
PTPRA-205ENST00000399903 FTSJ1Q9UET6 329 aa16.2■□□□□ 0.18
PTPRA-205ENST00000399903 SLC9A3R1O14745 358 aaPredicted RBP16.2■□□□□ 0.18
PTPRA-205ENST00000399903 TRIM3O75382 744 aaPredicted RBP16.2■□□□□ 0.18
PTPRA-205ENST00000399903 CLDN7O95471 211 aa16.2■□□□□ 0.18
PTPRA-205ENST00000399903 DRD5P21918 477 aa16.2■□□□□ 0.18
PTPRA-205ENST00000399903 PROKR2Q8NFJ6 384 aa16.2■□□□□ 0.18
PTPRA-205ENST00000399903 C11orf24Q96F05 449 aaPredicted RBP16.2■□□□□ 0.18
PTPRA-205ENST00000399903 ENAMQ9NRM1 1142 aa16.2■□□□□ 0.18
PTPRA-205ENST00000399903 HCN3Q9P1Z3 774 aa16.2■□□□□ 0.18
PTPRA-205ENST00000399903 CDH10Q9Y6N8 788 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms