RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ZNF195O14628 629 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 HS6ST1O60243 411 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 GDF9O60383 454 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 RNASEH1O60930 286 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 DUSP11O75319 330 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 VPS26AO75436 327 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 MBP02144 154 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 KRT6AP02538 564 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 SERPINA6P08185 405 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 FAM157BP0CG42 384 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 CCDC166P0CW27 439 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 PSMC3P17980 439 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 DLSTP36957 453 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 MAGEA6P43360 314 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 SLC6A12P48065 614 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 PAFAH1B3Q15102 231 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 STEAP4Q687X5 459 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 KIAA1324Q6UXG2 1013 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 LINC00523Q86TU6 105 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 NLGN4XQ8N0W4 816 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 OR7D4Q8NG98 312 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 OR13F1Q8NGS4 319 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 GLYATL2Q8WU03 294 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 DUS3LQ96G46 650 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 LRR1Q96L50 414 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 CPNE1Q99829 537 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 UBE2OQ9C0C9 1292 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 GCM1Q9NP62 436 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 CNGB3Q9NQW8 809 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 GKN1Q9NS71 199 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 LNPEPQ9UIQ6 1025 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 METRNQ9UJH8 293 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 LOC105369274A0A096LPK9 316 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 LOC102723532A0A0G2JNH3 316 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 A0A1W2PPV4 95 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 LNP1A1A4G5 178 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 OR6C70A6NIJ9 312 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 FOXE1O00358 373 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 SNPHO15079 494 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 ADAM12O43184 909 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 TRIM13O60858 407 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 CSO75390 466 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 TM7SF2O76062 418 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 IFNA14P01570 189 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 H2AFB2P0C5Z0 115 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 COX4I1P13073 169 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 LBPP18428 481 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 PIK3R1P27986 724 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 SLC9A3P48764 834 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 CCT3P49368 545 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 RPS24P62847 133 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 MS4A2Q01362 244 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 SIGLEC14Q08ET2 396 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 CDH17Q12864 832 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 SEMA3BQ13214 749 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 NRF1Q16656 503 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 WASHC2DQ5SRD0 308 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 TSTD2Q5T7W7 516 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 DLEU7Q6UYE1 221 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 ARHGAP22Q7Z5H3 698 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 TMEM135Q86UB9 458 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 IFNEQ86WN2 208 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 OR4N4Q8N0Y3 316 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 UBE2J2Q8N2K1 259 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 CDYL2Q8N8U2 506 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 HJURPQ8NCD3 748 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 MAGEC3Q8TD91 643 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 MYLIPQ8WY64 445 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 SMG7Q92540 1137 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 HAS2Q92819 552 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 OSTF1Q92882 214 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 REXO5Q96IC2 774 aaKnown RBP5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 CEP19Q96LK0 163 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 SGPP1Q9BX95 441 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 DERL2Q9GZP9 239 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 PLK2Q9NYY3 685 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 POMPQ9Y244 141 aa5.88□□□□□ -1.47
TRAPPC13-202ENST00000399438 C2orf78A6NCI8 922 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 AGAP5A6NIR3 686 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 H0YIG0 161 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 H3BQ06 376 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 RNF13O43567 381 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 SUPT7LO94864 414 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 CD1AP06126 327 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 SRPRAP08240 638 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 SLC2A3P11169 496 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 PEPDP12955 493 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 NQO2P16083 231 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 LRPAP1P30533 357 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 VIPR1P32241 457 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 LHX1P48742 406 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 CDC34P49427 236 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 CNN1P51911 297 aaKnown RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 LBX1P52954 281 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 CDKN2DP55273 166 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 POU6F2P78424 691 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 TAF10Q12962 218 aa5.87□□□□□ -1.47
TRAPPC13-202ENST00000399438 PMS2P3Q13401 168 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms