RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 PCSK4Q6UW60 755 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ZNF551Q7Z340 670 aaPredicted RBP11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 GPR155Q7Z3F1 870 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CPAMD8Q8IZJ3 1885 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 MORN4Q8NDC4 146 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 B3GNT7Q8NFL0 401 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ADCY4Q8NFM4 1077 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 NBEAQ8NFP9 2946 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 OR9A2Q8NGT5 310 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 OR14A16Q8NHC5 309 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 M1APQ8TC57 530 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 APOBEC4Q8WW27 367 aaKnown RBP11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 NCLNQ969V3 563 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 TESCQ96BS2 214 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CTHRC1Q96CG8 243 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SENP5Q96HI0 755 aaPredicted RBP11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 FBXL20Q96IG2 436 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 NPAS2Q99743 824 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PELOQ9BRX2 385 aaKnown RBP11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 DPY30Q9C005 99 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 TRIM4Q9C037 500 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ANKRA2Q9H9E1 313 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 MMP25Q9NPA2 562 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SH3BP4Q9P0V3 963 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PSME2Q9UL46 239 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ENTPD4Q9Y227 616 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ZNF780BQ9Y6R6 833 aa11.56□□□□□ -0.56
HLA-DQB1-203ENST00000399082 TMEM200CA6NKL6 621 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 MAN1A2O60476 641 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SHOX2O60902 331 aaPredicted RBP11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CBX7O95931 251 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ITGB2P05107 769 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 COX7A2P14406 83 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 NT5EP21589 574 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SSTR4P31391 388 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CDK9P50750 372 aaKnown RBP11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 NCBP2P52298 156 aaKnown RBP eCLIP11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ARFIP2P53365 341 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 RRADP55042 308 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 MRPS35P82673 323 aaKnown RBP11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 FUT7Q11130 342 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 MAP4K2Q12851 820 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 BIKQ13323 160 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ZNF267Q14586 743 aaPredicted RBP11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 EXT1Q16394 746 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 TRMT12Q53H54 448 aaKnown RBP11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 OR4F3Q6IEY1 312 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 H3F3CQ6NXT2 135 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 BORAQ6PGQ7 559 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 PAOXQ6QHF9 649 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 R3HCC1LQ7Z5L2 792 aaKnown RBP11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 FUNDC1Q8IVP5 155 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 GALNT12Q8IXK2 581 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 GALNT16Q8N428 558 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ZNF615Q8N8J6 731 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 FDCSPQ8NFU4 85 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 OR7G2Q8NG99 324 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 OR1N1Q8NGS0 311 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ZNF675Q8TD23 568 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 KAT2AQ92830 837 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 DAZLQ92904 295 aaKnown RBP11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 RIT1Q92963 219 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 RBM18Q96H35 190 aaKnown RBP11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 THOC3Q96J01 351 aaKnown RBP11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 OR8D2Q9GZM6 311 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 RABEP2Q9H5N1 569 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ATP13A2Q9NQ11 1180 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SLC52A3Q9NQ40 469 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SIRT3Q9NTG7 399 aaPredicted RBP11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ZIM2Q9NZV7 527 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ERVK-19Q9WJR5 959 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CLCA3PQ9Y6N3 262 aa11.55□□□□□ -0.56
HLA-DQB1-203ENST00000399082 TNRC6AQ8NDV7 1962 aaKnown RBP11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 A6NL46 340 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 K7EM74 188 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SNX3O60493 162 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 TNNI3P19429 210 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 NTSP30990 170 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SOX11P35716 441 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 RPL3P39023 403 aaKnown RBP11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 ATP4BP51164 291 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CCL11P51671 97 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 DGKQP52824 942 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 POLE2P56282 527 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SLC37A1P57057 533 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 RAPSNQ13702 412 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 EXOSC7Q15024 291 aaKnown RBP11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 FAM174BQ3ZCQ3 159 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CPTPQ5TA50 214 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 B3GNTL1Q67FW5 361 aaPredicted RBP11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 C9orf40Q8IXQ3 194 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 KBTBD2Q8IY47 623 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 SAMD14Q8IZD0 417 aaPredicted RBP11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CLECL1Q8IZS7 167 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 FAM9CQ8IZT9 166 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 MIER2Q8N344 545 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 VWA5B2Q8N398 1253 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 CLEC1AQ8NC01 280 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 C7orf57Q8NEG2 295 aa11.54□□□□□ -0.56
HLA-DQB1-203ENST00000399082 OR8J2Q8NGG1 315 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms