RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 CELA2BP08218 269 aaPredicted RBP24.29■■□□□ 1.48
SHARPIN-202ENST00000398712 CPN2P22792 545 aa24.29■■□□□ 1.48
SHARPIN-202ENST00000398712 PUM1Q14671 1186 aaKnown RBP eCLIP24.29■■□□□ 1.48
SHARPIN-202ENST00000398712 TMEM107Q6UX40 140 aa24.29■■□□□ 1.48
SHARPIN-202ENST00000398712 SPARTQ8N0X7 666 aa24.29■■□□□ 1.48
SHARPIN-202ENST00000398712 ZNF687Q8N1G0 1237 aa24.29■■□□□ 1.48
SHARPIN-202ENST00000398712 GPR32P1Q8NGA4 272 aa24.29■■□□□ 1.48
SHARPIN-202ENST00000398712 BAHD1Q8TBE0 780 aaPredicted RBP24.29■■□□□ 1.48
SHARPIN-202ENST00000398712 ZCCHC10Q8TBK6 192 aa24.29■■□□□ 1.48
SHARPIN-202ENST00000398712 ISOC1Q96CN7 298 aa24.29■■□□□ 1.48
SHARPIN-202ENST00000398712 SPATA5L1Q9BVQ7 753 aa24.29■■□□□ 1.48
SHARPIN-202ENST00000398712 FANCEQ9HB96 536 aa24.29■■□□□ 1.48
SHARPIN-202ENST00000398712 PRDM9Q9NQV7 894 aa24.29■■□□□ 1.48
SHARPIN-202ENST00000398712 KCND3Q9UK17 655 aa24.29■■□□□ 1.48
SHARPIN-202ENST00000398712 CA14Q9ULX7 337 aa24.29■■□□□ 1.48
SHARPIN-202ENST00000398712 TPRKBQ9Y3C4 175 aa24.29■■□□□ 1.48
SHARPIN-202ENST00000398712 CCNB2O95067 398 aa24.28■■□□□ 1.48
SHARPIN-202ENST00000398712 HMGN2P05204 90 aaKnown RBP24.28■■□□□ 1.48
SHARPIN-202ENST00000398712 ALPPL2P10696 532 aa24.28■■□□□ 1.48
SHARPIN-202ENST00000398712 SMAD2Q15796 467 aaKnown RBP24.28■■□□□ 1.48
SHARPIN-202ENST00000398712 FRMD1Q8N878 549 aa24.28■■□□□ 1.48
SHARPIN-202ENST00000398712 SLC24A3Q9HC58 644 aa24.28■■□□□ 1.48
SHARPIN-202ENST00000398712 BCL2L10Q9HD36 194 aa24.28■■□□□ 1.48
SHARPIN-202ENST00000398712 MS4A12Q9NXJ0 267 aa24.28■■□□□ 1.48
SHARPIN-202ENST00000398712 SCN3BQ9NY72 215 aa24.28■■□□□ 1.48
SHARPIN-202ENST00000398712 ENOPH1Q9UHY7 261 aa24.28■■□□□ 1.48
SHARPIN-202ENST00000398712 HCN4Q9Y3Q4 1203 aa24.28■■□□□ 1.48
SHARPIN-202ENST00000398712 GOLGA4Q13439 2230 aaKnown RBP24.27■■□□□ 1.48
SHARPIN-202ENST00000398712 PRAMEF27A3QJZ7 478 aa24.27■■□□□ 1.48
SHARPIN-202ENST00000398712 ZSCAN9O15535 394 aaPredicted RBP24.27■■□□□ 1.48
SHARPIN-202ENST00000398712 TRMUO75648 421 aaKnown RBP24.27■■□□□ 1.48
SHARPIN-202ENST00000398712 JUNDP17535 347 aa24.27■■□□□ 1.48
SHARPIN-202ENST00000398712 EPHA2P29317 976 aa24.27■■□□□ 1.48
SHARPIN-202ENST00000398712 TLX1P31314 330 aaPredicted RBP24.27■■□□□ 1.48
SHARPIN-202ENST00000398712 PXNP49023 591 aaPredicted RBP24.27■■□□□ 1.48
SHARPIN-202ENST00000398712 TUBA3CQ13748 450 aa24.27■■□□□ 1.48
SHARPIN-202ENST00000398712 GANABQ14697 944 aaKnown RBP24.27■■□□□ 1.48
SHARPIN-202ENST00000398712 LASP1Q14847 261 aaKnown RBP24.27■■□□□ 1.48
SHARPIN-202ENST00000398712 MAD2L1BPQ15013 274 aaPredicted RBP24.27■■□□□ 1.48
SHARPIN-202ENST00000398712 OOSP2Q86WS3 158 aa24.27■■□□□ 1.48
SHARPIN-202ENST00000398712 ERI1Q8IV48 349 aaKnown RBP24.27■■□□□ 1.48
SHARPIN-202ENST00000398712 TAGAPQ8N103 731 aa24.27■■□□□ 1.48
SHARPIN-202ENST00000398712 NODALQ96S42 347 aa24.27■■□□□ 1.48
SHARPIN-202ENST00000398712 C2orf42Q9NWW7 574 aa24.27■■□□□ 1.48
SHARPIN-202ENST00000398712 DUSP12Q9UNI6 340 aa24.27■■□□□ 1.48
SHARPIN-202ENST00000398712 NAALAD2Q9Y3Q0 740 aa24.27■■□□□ 1.48
SHARPIN-202ENST00000398712 IGHV1OR15-9A0A0B4J2B8 117 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 DCKP27707 260 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 DEFB134Q4QY38 66 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 COLEC12Q5KU26 742 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 MANEAQ5SRI9 462 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 PRAMEF8Q5VWM4 474 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 PRAMEF7Q5VXH5 474 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 XAF1Q6GPH4 301 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 RNF44Q7L0R7 432 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 DGLUCYQ7Z3D6 616 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 B3GNT8Q7Z7M8 397 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 NUP43Q8NFH3 380 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 OR9A2Q8NGT5 310 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 ELP4Q96EB1 424 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 C10orf90Q96M02 699 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 SLC6A18Q96N87 628 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 ORAI3Q9BRQ5 295 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 BTBD2Q9BX70 525 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 KLHL25Q9H0H3 589 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 KCMF1Q9P0J7 381 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 MRPS17Q9Y2R5 130 aaKnown RBP24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 CCDC88CQ9P219 2028 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 H0YGG7 62 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 HTR1AP08908 422 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 PTGER1P34995 402 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 ARF3P61204 181 aaPredicted RBP24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 HHEXQ03014 270 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 CCDC85BQ15834 202 aaPredicted RBP24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 PROX2Q3B8N5 592 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 FRMPD2BQ6IN97 320 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 LRRC25Q8N386 305 aaPredicted RBP24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 OR13F1Q8NGS4 319 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 ZDHHC1Q8WTX9 485 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 RLN3Q8WXF3 142 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 KLHL6Q8WZ60 621 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 ALPK1Q96QP1 1244 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 TPSD1Q9BZJ3 242 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 EVA1BQ9NVM1 165 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 RLIMQ9NVW2 624 aa24.26■■□□□ 1.47
SHARPIN-202ENST00000398712 LOC105369274A0A096LPK9 316 aa24.25■■□□□ 1.47
SHARPIN-202ENST00000398712 LOC102723532A0A0G2JNH3 316 aa24.25■■□□□ 1.47
SHARPIN-202ENST00000398712 PTGES3LE9PB15 166 aa24.25■■□□□ 1.47
SHARPIN-202ENST00000398712 PCDH17O14917 1159 aa24.25■■□□□ 1.47
SHARPIN-202ENST00000398712 ASNA1O43681 348 aa24.25■■□□□ 1.47
SHARPIN-202ENST00000398712 NDUFS2O75306 463 aa24.25■■□□□ 1.47
SHARPIN-202ENST00000398712 ALOX12P18054 663 aa24.25■■□□□ 1.47
SHARPIN-202ENST00000398712 FMO3P31513 532 aa24.25■■□□□ 1.47
SHARPIN-202ENST00000398712 MC3RP41968 323 aa24.25■■□□□ 1.47
SHARPIN-202ENST00000398712 LSSP48449 732 aa24.25■■□□□ 1.47
SHARPIN-202ENST00000398712 LIM2P55344 173 aa24.25■■□□□ 1.47
SHARPIN-202ENST00000398712 CWF19L1Q69YN2 538 aaKnown RBP24.25■■□□□ 1.47
SHARPIN-202ENST00000398712 GPR153Q6NV75 609 aa24.25■■□□□ 1.47
SHARPIN-202ENST00000398712 ARMC6Q6NXE6 501 aa24.25■■□□□ 1.47
SHARPIN-202ENST00000398712 OR4N4Q8N0Y3 316 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms