RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 ATAT1Q5SQI0 421 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 PARM1Q6UWI2 310 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 PLEKHM3Q6ZWE6 761 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 PARGQ86W56 976 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 LAS2Q8IYD9 372 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 LINC01555Q8NAE3 123 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 OR4K5Q8NGD3 323 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 APH1BQ8WW43 257 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 FKBP10Q96AY3 582 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 WFDC6Q9BQY6 131 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 GLIPR2Q9H4G4 154 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 NEUROD4Q9HD90 331 aa9.89□□□□□ -0.83
CPSF1P1-201ENST00000397477 ASCC3Q8N3C0 2202 aaKnown RBP9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 NOTCH4Q99466 2003 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 NPIPA5A0A0B4J1W7 369 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 A8MU76 341 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 NPIPA7E9PJI5 369 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 LINC01565O15544 149 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 PAPLNO95428 1278 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 NPIPA8P0DM63 369 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 ADORA3P0DMS8 318 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 IL1RNP18510 177 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 EPHA5P54756 1037 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 TPTEP56180 551 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 CSNK1G2P78368 415 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 SEC23BQ15437 767 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 KLHL12Q53G59 568 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 SLC35F1Q5T1Q4 408 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 CCNJQ5T5M9 372 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 ZC3H14Q6PJT7 736 aaKnown RBP9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 Q6ZNX1 250 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 PLPP6Q8IY26 295 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 ACOT4Q8N9L9 421 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 SIPA1Q96FS4 1042 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 TEFMQ96QE5 360 aaKnown RBP9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 TSSK6Q9BXA6 273 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 TTTY10Q9BZA0 68 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 MVB12BQ9H7P6 319 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 STARD5Q9NSY2 213 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 KLHL28Q9NXS3 571 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 PAIP2BQ9ULR5 123 aaKnown RBP9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 NTNG1Q9Y2I2 539 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 SPIN1Q9Y657 262 aaPredicted RBP9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 ANAPC1Q9H1A4 1944 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 POM121BA6NF01 834 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 CTDSP2O14595 271 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 GMFGO60234 142 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 GABARAPO95166 117 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 CDK1P06493 297 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 PVRP15151 417 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 TYRP1P17643 537 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 CSNK2A2P19784 350 aaPredicted RBP9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 CPN2P22792 545 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 CMPK1P30085 196 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 CD6P30203 668 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 BCL6P41182 706 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 TGM4P49221 684 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 TGM3Q08188 693 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 C1orf61Q13536 156 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 PUM1Q14671 1186 aaKnown RBP eCLIP9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 LHFPL3Q86UP9 236 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 NLRP8Q86W28 1048 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 FBXL6Q8N531 539 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 DEFB119Q8N690 84 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 DTX3Q8N9I9 347 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 FAM46DQ8NEK8 389 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 OR52E4Q8NGH9 312 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 RHOXF1Q8NHV9 184 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 HERVK_113Q902F9 699 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 LRR1Q96L50 414 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 CCDC3Q9BQI4 270 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 TBC1D17Q9HA65 648 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 ZNF226Q9NYT6 803 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 KLHL3Q9UH77 587 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 PSORS1C1Q9UIG5 152 aa9.88□□□□□ -0.83
CPSF1P1-201ENST00000397477 NARSO43776 548 aaKnown RBP9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 CDC123O75794 336 aaPredicted RBP9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 IMPDH2P12268 514 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 NT5EP21589 574 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 GPR4P46093 362 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 PIP5KL1Q5T9C9 394 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 METRNLQ641Q3 311 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 FAHD1Q6P587 224 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 VRK2Q86Y07 508 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 TEX47Q8TBZ9 253 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 HMGB4Q8WW32 186 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 MAT2BQ9NZL9 334 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 PCDHGA2Q9Y5H1 932 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 SCN2AQ99250 2005 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 C17orf113A0A1B0GUU1 675 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 OR2A25A4D2G3 310 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 CLDN24A6NM45 220 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 AP3D1O14617 1153 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 LILRB5O75023 590 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 KLF8O95600 359 aaPredicted RBP9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 BSGP35613 385 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 OPRD1P41143 372 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 INPP1P49441 399 aa9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 NKX2-5P52952 324 aaPredicted RBP9.87□□□□□ -0.83
CPSF1P1-201ENST00000397477 MVDP53602 400 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms