RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 REXO5Q96IC2 774 aaKnown RBP25.77■■□□□ 1.72
CPNE1-203ENST00000397442 ANKRA2Q9H9E1 313 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 MKKSQ9NPJ1 570 aaPredicted RBP25.77■■□□□ 1.72
CPNE1-203ENST00000397442 NECTIN3Q9NQS3 549 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 ZCCHC3Q9NUD5 404 aaKnown RBP25.77■■□□□ 1.72
CPNE1-203ENST00000397442 CTSFQ9UBX1 484 aa25.77■■□□□ 1.72
CPNE1-203ENST00000397442 IGLV3-12A0A075B6K2 115 aa25.76■■□□□ 1.71
CPNE1-203ENST00000397442 PMS2P1A4D2B8 440 aa25.76■■□□□ 1.71
CPNE1-203ENST00000397442 PLOD2O00469 737 aa25.76■■□□□ 1.71
CPNE1-203ENST00000397442 CPNE3O75131 537 aaKnown RBP25.76■■□□□ 1.71
CPNE1-203ENST00000397442 NHLH1Q02575 133 aa25.76■■□□□ 1.71
CPNE1-203ENST00000397442 MGAT2Q10469 447 aa25.76■■□□□ 1.71
CPNE1-203ENST00000397442 HES3Q5TGS1 186 aa25.76■■□□□ 1.71
CPNE1-203ENST00000397442 DGAT2L6Q6ZPD8 337 aa25.76■■□□□ 1.71
CPNE1-203ENST00000397442 RAB11FIP2Q7L804 512 aa25.76■■□□□ 1.71
CPNE1-203ENST00000397442 PPWD1Q96BP3 646 aaKnown RBP25.76■■□□□ 1.71
CPNE1-203ENST00000397442 ALOXE3Q9BYJ1 711 aa25.76■■□□□ 1.71
CPNE1-203ENST00000397442 NTMQ9P121 344 aa25.76■■□□□ 1.71
CPNE1-203ENST00000397442 ACTR3BQ9P1U1 418 aa25.76■■□□□ 1.71
CPNE1-203ENST00000397442 SPAARA0A1B0GVQ0 90 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 A0A1W2PNU3 283 aaPredicted RBP25.75■■□□□ 1.71
CPNE1-203ENST00000397442 TM4SF5O14894 197 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 ARPC2O15144 300 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 TNFRSF21O75509 655 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 NUDT7P0C024 238 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 CDK4P11802 303 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 ETFAP13804 333 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 DCDP81605 110 aaKnown RBP25.75■■□□□ 1.71
CPNE1-203ENST00000397442 STX4Q12846 297 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 FADDQ13158 208 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 TP53BP2Q13625 1128 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 PRICKLE4Q2TBC4 344 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 ZZZ3Q8IYH5 903 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 MICU2Q8IYU8 434 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 BHLHE22Q8NFJ8 381 aaPredicted RBP25.75■■□□□ 1.71
CPNE1-203ENST00000397442 MAGED4Q96JG8 741 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 TGIF2Q9GZN2 237 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 MUC13Q9H3R2 512 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 SERHL2Q9H4I8 314 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 RAPGEFL1Q9UHV5 662 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 MMACHCQ9Y4U1 282 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 SNX13Q9Y5W8 968 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 GVINP1Q7Z2Y8 2422 aa25.75■■□□□ 1.71
CPNE1-203ENST00000397442 IGKV3D-11A0A0A0MRZ8 115 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 ELOVL7A1L3X0 281 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 UPK1AO00322 258 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 NCK1P16333 377 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 ATP6V1B2P21281 511 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 CRATP43155 626 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 RPS26P62854 115 aaKnown RBP25.74■■□□□ 1.71
CPNE1-203ENST00000397442 CYP51A1Q16850 503 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 FHL5Q5TD97 284 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 FAM111BQ6SJ93 734 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 QSOX2Q6ZRP7 698 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 DHFR2Q86XF0 187 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 ST13P4Q8IZP2 240 aaPredicted RBP25.74■■□□□ 1.71
CPNE1-203ENST00000397442 SIMC1Q8NDZ2 872 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 ZNF675Q8TD23 568 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 DEPDC7Q96QD5 511 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 RAD21L1Q9H4I0 556 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 MAT2BQ9NZL9 334 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 DMXL1Q9Y485 3027 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 MEN1O00255 615 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 EMC8O43402 210 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 FTH1P19P0C7X4 201 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 GGT1P19440 569 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 CSRP1P21291 193 aaKnown RBP25.74■■□□□ 1.71
CPNE1-203ENST00000397442 RHAGQ02094 409 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 LCN10Q6JVE6 187 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 LCN8Q6JVE9 175 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 CYP2R1Q6VVX0 501 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 OR2L13Q8N349 312 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 HIPK4Q8NE63 616 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 DOK4Q8TEW6 326 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 MOAP1Q96BY2 351 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 CTHRC1Q96CG8 243 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 AKIRIN1Q9H9L7 192 aaPredicted RBP25.74■■□□□ 1.71
CPNE1-203ENST00000397442 B3GALT1Q9Y5Z6 326 aa25.74■■□□□ 1.71
CPNE1-203ENST00000397442 GIMAP1-GIMAP5A0A087WTJ2 511 aa25.73■■□□□ 1.71
CPNE1-203ENST00000397442 CT62P0C5K7 136 aa25.73■■□□□ 1.71
CPNE1-203ENST00000397442 BMP2P12643 396 aa25.73■■□□□ 1.71
CPNE1-203ENST00000397442 NT5EP21589 574 aa25.73■■□□□ 1.71
CPNE1-203ENST00000397442 TRMT12Q53H54 448 aaKnown RBP25.73■■□□□ 1.71
CPNE1-203ENST00000397442 CEACAM20Q6UY09 585 aa25.73■■□□□ 1.71
CPNE1-203ENST00000397442 LAPTM4BQ86VI4 370 aa25.73■■□□□ 1.71
CPNE1-203ENST00000397442 OR56A1Q8NGH5 318 aa25.73■■□□□ 1.71
CPNE1-203ENST00000397442 GIMAP5Q96F15 307 aa25.73■■□□□ 1.71
CPNE1-203ENST00000397442 PTCHD1Q96NR3 888 aa25.73■■□□□ 1.71
CPNE1-203ENST00000397442 SPATA9Q9BWV2 254 aa25.73■■□□□ 1.71
CPNE1-203ENST00000397442 C3orf14Q9HBI5 128 aa25.73■■□□□ 1.71
CPNE1-203ENST00000397442 RECKO95980 971 aa25.72■■□□□ 1.71
CPNE1-203ENST00000397442 IFI6P09912 130 aa25.72■■□□□ 1.71
CPNE1-203ENST00000397442 STT3AP46977 705 aa25.72■■□□□ 1.71
CPNE1-203ENST00000397442 RAB15P59190 212 aa25.72■■□□□ 1.71
CPNE1-203ENST00000397442 PRR5P85299 388 aa25.72■■□□□ 1.71
CPNE1-203ENST00000397442 RIPK1Q13546 671 aa25.72■■□□□ 1.71
CPNE1-203ENST00000397442 VMACQ2NL98 169 aa25.72■■□□□ 1.71
CPNE1-203ENST00000397442 MINDY4Q4G0A6 757 aa25.72■■□□□ 1.71
CPNE1-203ENST00000397442 SZRD1Q7Z422 152 aa25.72■■□□□ 1.71
CPNE1-203ENST00000397442 HORMAD2Q8N7B1 307 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms