RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ADORA3P0DMS8 318 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 IFNGR1P15260 489 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 RIN1Q13671 783 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 CHRFAM7AQ494W8 412 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 ZC3H14Q6PJT7 736 aaKnown RBP5.22□□□□□ -1.57
VPS13C-204ENST00000395898 FXYD6Q9H0Q3 95 aa5.22□□□□□ -1.57
VPS13C-204ENST00000395898 HEPACAM2A8MVW5 462 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 SCAMP2O15127 329 aaKnown RBP5.21□□□□□ -1.57
VPS13C-204ENST00000395898 GJB5O95377 273 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 GTF2F2P13984 249 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 AGTR1P30556 359 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 GKP32189 559 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 GGT5P36269 586 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 SLC9A3P48764 834 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 GABARAPL2P60520 117 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 GALK2Q01415 458 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 HHEXQ03014 270 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 KCNAB2Q13303 367 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 NSDHLQ15738 373 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 PPP1R3AQ16821 1122 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 PROX2Q3B8N5 592 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 TMEM107Q6UX40 140 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 IGDCC3Q8IVU1 814 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 FOXRED2Q8IWF2 684 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 GLIS1Q8NBF1 620 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 DNAAF1Q8NEP3 725 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 GPN2Q9H9Y4 310 aaPredicted RBP5.21□□□□□ -1.57
VPS13C-204ENST00000395898 GSKIPQ9P0R6 139 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 PPP4R1LQ9P1A2 415 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 NFS1Q9Y697 457 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 ACOT7O00154 380 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 GPR37L1O60883 481 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 RNGTTO60942 597 aaKnown RBP5.21□□□□□ -1.57
VPS13C-204ENST00000395898 RGS9O75916 674 aaPredicted RBP5.21□□□□□ -1.57
VPS13C-204ENST00000395898 GCGRP47871 477 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 MTNR1AP48039 350 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 TUBB3Q13509 450 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 DNASE1L3Q13609 305 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 SAMD12Q8N8I0 201 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 RAB8BQ92930 207 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 OR1F2PQ96R84 312 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 ACTRT3Q9BYD9 372 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 UCKL1Q9NWZ5 548 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 NKX1-2Q9UD57 310 aaPredicted RBP5.21□□□□□ -1.57
VPS13C-204ENST00000395898 CYP8B1Q9UNU6 501 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 PKD1L3Q7Z443 1732 aa5.21□□□□□ -1.57
VPS13C-204ENST00000395898 CLCA1A8K7I4 914 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 M0R233 179 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 KLF8O95600 359 aaPredicted RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 CD3GP09693 182 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ELK4P28324 431 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 MLLT1Q03111 559 aaPredicted RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 TDGQ13569 410 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 GINS1Q14691 196 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 PTPRCAPQ14761 206 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 GRM7Q14831 915 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ODF4Q2M2E3 257 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 PIGGQ5H8A4 983 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 STEAP4Q687X5 459 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ARMCX6Q7L4S7 300 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 Q8N402 240 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 C16orf58Q96GQ5 468 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 METTL2AQ96IZ6 378 aaKnown RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 CCDC32Q9BV29 185 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF700Q9H0M5 742 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 EXTL2Q9UBQ6 330 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 CNOT11Q9UKZ1 510 aaKnown RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 IGLON5A6NGN9 336 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 CDC123O75794 336 aaPredicted RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 OR2B3O76000 313 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 BEST1O76090 585 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 FGF4P08620 206 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ADRB3P13945 408 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF16P17020 682 aaPredicted RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 OR4D2P58180 307 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 LIPKQ5VXJ0 399 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 WDTC1Q8N5D0 677 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 OR10Q1Q8NGQ4 319 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 STOML3Q8TAV4 291 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ISG20Q96AZ6 181 aaKnown RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 DPH7Q9BTV6 452 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 HERC2P3Q9BVR0 1158 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 FAM118AQ9NWS6 357 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 RDH8Q9NYR8 311 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 STUB1Q9UNE7 303 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 LAMTOR5O43504 91 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 LHCGRP22888 699 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 STK19P49842 368 aaPredicted RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 DIO3P55073 304 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ARF3P61204 181 aaPredicted RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ARF1P84077 181 aaKnown RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 PLCXD2Q0VAA5 305 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 HNRNPA0Q13151 305 aaKnown RBP5.21□□□□□ -1.58
VPS13C-204ENST00000395898 MFSD13AQ14CX5 517 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 DEFB134Q4QY38 66 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 SLC18B1Q6NT16 456 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ZER1Q7Z7L7 766 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 MARVELD2Q8N4S9 558 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 CSNK1A1LQ8N752 337 aa5.21□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF283Q8N7M2 679 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms