RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 NRG3P56975 720 aa12.69□□□□□ -0.38
CXCL12-205ENST00000395794 KCNJ2P63252 427 aa12.69□□□□□ -0.38
CXCL12-205ENST00000395794 ADORA2A-AS1P86434 159 aa12.69□□□□□ -0.38
CXCL12-205ENST00000395794 CSTF3Q12996 717 aaKnown RBP12.69□□□□□ -0.38
CXCL12-205ENST00000395794 LCP2Q13094 533 aa12.69□□□□□ -0.38
CXCL12-205ENST00000395794 EBPQ15125 230 aaKnown RBP12.69□□□□□ -0.38
CXCL12-205ENST00000395794 ZNF630Q2M218 657 aaPredicted RBP12.69□□□□□ -0.38
CXCL12-205ENST00000395794 ZNF791Q3KP31 576 aaPredicted RBP12.69□□□□□ -0.38
CXCL12-205ENST00000395794 TMEM211Q6ICI0 200 aa12.69□□□□□ -0.38
CXCL12-205ENST00000395794 C3P1Q6ZMU1 363 aa12.69□□□□□ -0.38
CXCL12-205ENST00000395794 CD163Q86VB7 1156 aa12.69□□□□□ -0.38
CXCL12-205ENST00000395794 ZGRF1Q86YA3 2104 aa12.69□□□□□ -0.38
CXCL12-205ENST00000395794 GSPT2Q8IYD1 628 aaKnown RBP12.69□□□□□ -0.38
CXCL12-205ENST00000395794 FAM109AQ8N4B1 249 aa12.69□□□□□ -0.38
CXCL12-205ENST00000395794 GBP7Q8N8V2 638 aaPredicted RBP12.69□□□□□ -0.38
CXCL12-205ENST00000395794 OR7G1Q8NGA0 311 aa12.69□□□□□ -0.38
CXCL12-205ENST00000395794 PHF10Q8WUB8 498 aaKnown RBP12.69□□□□□ -0.38
CXCL12-205ENST00000395794 UCN3Q969E3 161 aa12.69□□□□□ -0.38
CXCL12-205ENST00000395794 TP53INP1Q96A56 240 aa12.69□□□□□ -0.38
CXCL12-205ENST00000395794 TMEM237Q96Q45 408 aa12.69□□□□□ -0.38
CXCL12-205ENST00000395794 TP63Q9H3D4 680 aaPredicted RBP12.69□□□□□ -0.38
CXCL12-205ENST00000395794 LDAHQ9H6V9 325 aa12.69□□□□□ -0.38
CXCL12-205ENST00000395794 BOKQ9UMX3 212 aaPredicted RBP12.69□□□□□ -0.38
CXCL12-205ENST00000395794 PCDHA9Q9Y5H5 950 aa12.69□□□□□ -0.38
CXCL12-205ENST00000395794 ZNF780BQ9Y6R6 833 aa12.69□□□□□ -0.38
CXCL12-205ENST00000395794 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.69□□□□□ -0.38
CXCL12-205ENST00000395794 NAV2Q8IVL1 2488 aa12.69□□□□□ -0.38
CXCL12-205ENST00000395794 UNC79Q9P2D8 2635 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 CROCCQ5TZA2 2017 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 A0A0G2JMM0 328 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 ATP6AP2A0A1C7CYW4 349 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 A0A1W2PPB8 328 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 A0A1W2PRS3 328 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 PINLYPA6NC86 204 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 KIR3DP1A8MWS1 328 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 TP53I11O14683 189 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 ZNF354AO60765 605 aaPredicted RBP12.68□□□□□ -0.38
CXCL12-205ENST00000395794 GLRA3O75311 464 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 CRCPO75575 148 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 ERAL1O75616 437 aaKnown RBP12.68□□□□□ -0.38
CXCL12-205ENST00000395794 ATP6AP2O75787 350 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 GLSO94925 669 aaPredicted RBP12.68□□□□□ -0.38
CXCL12-205ENST00000395794 CLDN14O95500 239 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 FBXO45P0C2W1 286 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 CPMP14384 443 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 SSTR4P31391 388 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 DNASE1L1P49184 302 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 ALDH9A1P49189 494 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 TMED10P49755 219 aaKnown RBP12.68□□□□□ -0.38
CXCL12-205ENST00000395794 NR0B1P51843 470 aaKnown RBP12.68□□□□□ -0.38
CXCL12-205ENST00000395794 NAA20P61599 178 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 TRA2BP62995 288 aaKnown RBP12.68□□□□□ -0.38
CXCL12-205ENST00000395794 RPP38P78345 283 aaKnown RBP12.68□□□□□ -0.38
CXCL12-205ENST00000395794 GALNT1Q10472 559 aaPredicted RBP12.68□□□□□ -0.38
CXCL12-205ENST00000395794 SLC10A1Q14973 349 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 CFAP157Q5JU67 520 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 SLC48A1Q6P1K1 146 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 FGD2Q7Z6J4 655 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 CHERPQ8IWX8 916 aaKnown RBP12.68□□□□□ -0.38
CXCL12-205ENST00000395794 FBXW8Q8N3Y1 598 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 TMEM251Q8N6I4 163 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 C1orf52Q8N6N3 182 aaKnown RBP12.68□□□□□ -0.38
CXCL12-205ENST00000395794 CCNYL1Q8N7R7 359 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 OR5M3Q8NGP4 307 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 PAQR8Q8TEZ7 354 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 CA5BP1Q8WTZ4 195 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.68□□□□□ -0.382e-6■■■□□ 18.6
CXCL12-205ENST00000395794 KLHL29Q96CT2 875 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 L3HYPDHQ96EM0 354 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 HBEGFQ99075 208 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 BRINP2Q9C0B6 783 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 OR10A5Q9H207 317 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 EXO5Q9H790 373 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 ZDHHC11Q9H8X9 412 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 PFDN4Q9NQP4 134 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 TUBA8Q9NY65 449 aaPredicted RBP12.68□□□□□ -0.38
CXCL12-205ENST00000395794 B4GALT7Q9UBV7 327 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 CFL2Q9Y281 166 aa12.68□□□□□ -0.38
CXCL12-205ENST00000395794 NBPF19A0A087WUL8 3843 aa12.67□□□□□ -0.38
CXCL12-205ENST00000395794 GNG14A0A1W2PPG7 69 aa12.67□□□□□ -0.38
CXCL12-205ENST00000395794 OR14I1A6ND48 311 aa12.67□□□□□ -0.38
CXCL12-205ENST00000395794 SMIM23A6NLE4 172 aa12.67□□□□□ -0.38
CXCL12-205ENST00000395794 NPIPA2E9PIF3 369 aa12.67□□□□□ -0.38
CXCL12-205ENST00000395794 NPIPA3F8WFD2 350 aa12.67□□□□□ -0.38
CXCL12-205ENST00000395794 BCKDKO14874 412 aa12.67□□□□□ -0.38
CXCL12-205ENST00000395794 NADKO95544 446 aaPredicted RBP12.67□□□□□ -0.38
CXCL12-205ENST00000395794 COX6B1P14854 86 aa12.67□□□□□ -0.38
CXCL12-205ENST00000395794 PIGAP37287 484 aa12.67□□□□□ -0.38
CXCL12-205ENST00000395794 FEN1P39748 380 aaKnown RBP12.67□□□□□ -0.38
CXCL12-205ENST00000395794 MAGEA5P43359 124 aa12.67□□□□□ -0.38
CXCL12-205ENST00000395794 SLCO1A2P46721 670 aa12.67□□□□□ -0.38
CXCL12-205ENST00000395794 ACSM2AQ08AH3 577 aa12.67□□□□□ -0.38
CXCL12-205ENST00000395794 FUT7Q11130 342 aa12.67□□□□□ -0.38
CXCL12-205ENST00000395794 HYAL4Q2M3T9 481 aa12.67□□□□□ -0.38
CXCL12-205ENST00000395794 CCDC153Q494R4 210 aa12.67□□□□□ -0.38
CXCL12-205ENST00000395794 SPIN4Q56A73 249 aa12.67□□□□□ -0.38
CXCL12-205ENST00000395794 TBCELQ5QJ74 424 aa12.67□□□□□ -0.38
CXCL12-205ENST00000395794 ACSM2BQ68CK6 577 aa12.67□□□□□ -0.38
CXCL12-205ENST00000395794 VWA5B2Q8N398 1253 aa12.67□□□□□ -0.38
CXCL12-205ENST00000395794 CCDC63Q8NA47 563 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms