RNA–Protein interactions for RNA: ENST00000395131.5

PFDN6-204, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-204ENST00000395131 RAB8AP61006 207 aa12.5□□□□□ -0.41
PFDN6-204ENST00000395131 LOXL1Q08397 574 aaPredicted RBP12.5□□□□□ -0.41
PFDN6-204ENST00000395131 ASPHQ12797 758 aa12.5□□□□□ -0.41
PFDN6-204ENST00000395131 SLC13A2Q13183 592 aa12.5□□□□□ -0.41
PFDN6-204ENST00000395131 SNX1Q13596 522 aa12.5□□□□□ -0.41
PFDN6-204ENST00000395131 SQLEQ14534 574 aa12.5□□□□□ -0.41
PFDN6-204ENST00000395131 LCTLQ6UWM7 567 aa12.5□□□□□ -0.41
PFDN6-204ENST00000395131 ZNF550Q7Z398 422 aa12.5□□□□□ -0.41
PFDN6-204ENST00000395131 CCDC25Q86WR0 208 aa12.5□□□□□ -0.41
PFDN6-204ENST00000395131 GCNT2Q8N0V5 402 aa12.5□□□□□ -0.41
PFDN6-204ENST00000395131 DEPDC4Q8N2C3 294 aa12.5□□□□□ -0.41
PFDN6-204ENST00000395131 CHMP6Q96FZ7 201 aa12.5□□□□□ -0.41
PFDN6-204ENST00000395131 ZNF597Q96LX8 424 aa12.5□□□□□ -0.41
PFDN6-204ENST00000395131 FAM111AQ96PZ2 611 aa12.5□□□□□ -0.41
PFDN6-204ENST00000395131 NPLQ9BXD5 320 aaPredicted RBP12.5□□□□□ -0.41
PFDN6-204ENST00000395131 CCDC134Q9H6E4 229 aa12.5□□□□□ -0.41
PFDN6-204ENST00000395131 CLCF1Q9UBD9 225 aa12.5□□□□□ -0.41
PFDN6-204ENST00000395131 ZNF148Q9UQR1 794 aa12.5□□□□□ -0.41
PFDN6-204ENST00000395131 TCAF1Q9Y4C2 921 aa12.5□□□□□ -0.41
PFDN6-204ENST00000395131 LMX1BO60663 402 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 ESR1P03372 595 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 ABHD2P08910 425 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 DANCRP0C864 163 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 MPC1LP0DKB6 136 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 CDH1P12830 882 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 POU2F1P14859 743 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 NPPBP16860 134 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 CCND1P24385 295 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 FMO4P31512 558 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 HNRNPFP52597 415 aaKnown RBP12.49□□□□□ -0.41
PFDN6-204ENST00000395131 NAGLUP54802 743 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 FNDC7Q5VTL7 733 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 CYB5R2Q6BCY4 276 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 CYHR1Q6ZMK1 362 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 CCDC121Q6ZUS5 278 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 ZNF595Q8IYB9 648 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 RFLNBQ8N5W9 214 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 TMEM52Q8NDY8 209 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 OR10G3Q8NGC4 313 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 SLC2A12Q8TD20 617 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 ZNF721Q8TF20 911 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 SREK1Q8WXA9 508 aaKnown RBP12.49□□□□□ -0.41
PFDN6-204ENST00000395131 LPGAT1Q92604 370 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 ZC3HAV1LQ96H79 300 aaKnown RBP12.49□□□□□ -0.41
PFDN6-204ENST00000395131 SLC39A3Q9BRY0 314 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 RHNO1Q9BSD3 238 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 G6PC3Q9BUM1 346 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 PHACTR1Q9C0D0 580 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 OR8D2Q9GZM6 311 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 INTS9Q9NV88 658 aaKnown RBP12.49□□□□□ -0.41
PFDN6-204ENST00000395131 ACTL7BQ9Y614 415 aa12.49□□□□□ -0.41
PFDN6-204ENST00000395131 NOTCH1P46531 2555 aa12.48□□□□□ -0.41
PFDN6-204ENST00000395131 ERI2A8K979 691 aaKnown RBP12.48□□□□□ -0.41
PFDN6-204ENST00000395131 C4orf51C9J302 202 aa12.48□□□□□ -0.41
PFDN6-204ENST00000395131 SHBGP04278 402 aa12.48□□□□□ -0.41
PFDN6-204ENST00000395131 THBDP07204 575 aa12.48□□□□□ -0.41
PFDN6-204ENST00000395131 FBXO45P0C2W1 286 aa12.48□□□□□ -0.41
PFDN6-204ENST00000395131 SCTRP47872 440 aa12.48□□□□□ -0.41
PFDN6-204ENST00000395131 COMPP49747 757 aaPredicted RBP12.48□□□□□ -0.41
PFDN6-204ENST00000395131 CCR8P51685 355 aa12.48□□□□□ -0.41
PFDN6-204ENST00000395131 CLCN7P51798 805 aa12.48□□□□□ -0.41
PFDN6-204ENST00000395131 RAB38P57729 211 aa12.48□□□□□ -0.41
PFDN6-204ENST00000395131 RUNX2Q13950 521 aa12.48□□□□□ -0.41
PFDN6-204ENST00000395131 EIPR1Q53HC9 387 aa12.48□□□□□ -0.41
PFDN6-204ENST00000395131 TNFAIP8L3Q5GJ75 292 aa12.48□□□□□ -0.41
PFDN6-204ENST00000395131 HIST2H2BDQ6DRA6 164 aa12.48□□□□□ -0.41
PFDN6-204ENST00000395131 OR10H5Q8NGA6 315 aa12.48□□□□□ -0.41
PFDN6-204ENST00000395131 AKAP1Q92667 903 aaKnown RBP eCLIP12.48□□□□□ -0.41
PFDN6-204ENST00000395131 FAM136AQ96C01 138 aa12.48□□□□□ -0.41
PFDN6-204ENST00000395131 CDC42EP4Q9H3Q1 356 aaKnown RBP12.48□□□□□ -0.41
PFDN6-204ENST00000395131 KLHL31Q9H511 634 aa12.48□□□□□ -0.41
PFDN6-204ENST00000395131 BARX1Q9HBU1 254 aaPredicted RBP12.48□□□□□ -0.41
PFDN6-204ENST00000395131 KLHL42Q9P2K6 505 aa12.48□□□□□ -0.41
PFDN6-204ENST00000395131 C15orf41Q9Y2V0 281 aa12.48□□□□□ -0.41
PFDN6-204ENST00000395131 TRRAPQ9Y4A5 3859 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 IGHV4-30-2A0A087WSY4 118 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 LIASO43766 372 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 CTNSO60931 367 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 CDH16O75309 829 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 SMNDC1O75940 238 aaKnown RBP eCLIP12.47□□□□□ -0.41
PFDN6-204ENST00000395131 SNX4O95219 450 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 IFNA16P05015 189 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 SERPIND1P05546 499 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 SOD3P08294 240 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 CHN1P15882 459 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 PPP3CBP16298 524 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 PAMP19021 973 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 IGFBP5P24593 272 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 IVDP26440 423 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 SERPINB3P29508 390 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 GMPRP36959 345 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 MORF4L2Q15014 288 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 NTRK2Q16620 822 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 TBC1D19Q8N5T2 526 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 GPATCH11Q8N954 259 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 TRPV3Q8NET8 790 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 DYDC1Q8WWB3 177 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 GTPBP3Q969Y2 492 aaKnown RBP12.47□□□□□ -0.41
PFDN6-204ENST00000395131 CTHRC1Q96CG8 243 aa12.47□□□□□ -0.41
PFDN6-204ENST00000395131 LCORQ96JN0 433 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms