RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TAS2R38P59533 333 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 GPR19Q15760 415 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 LINC00299Q6ZSB3 139 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 DGLUCYQ7Z3D6 616 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 LINC01555Q8NAE3 123 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 JPH3Q8WXH2 748 aaPredicted RBP12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 TEFMQ96QE5 360 aaKnown RBP12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 UCK2Q9BZX2 261 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 CLN6Q9NWW5 311 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 FBXL12Q9NXK8 326 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 OBP2AQ9NY56 170 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 TVP23BQ9NYZ1 205 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 PLEKHM1Q9Y4G2 1056 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 OR1A2Q9Y585 309 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 TRIOO75962 3097 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 DSPPQ9NZW4 1301 aa12.76□□□□□ -0.37
GTF2F1-201ENST00000394456 PDPK1O15530 556 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 SLC28A2O43868 658 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 PRKYO43930 277 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 CLEC2LP0C7M8 214 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 SNRPNP63162 240 aaKnown RBP12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 TARDBPQ13148 414 aaKnown RBP eCLIP12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 PGBD2Q6P3X8 592 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 SHFQ7M4L6 423 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 ADCK2Q7Z695 626 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 KBTBD8Q8NFY9 601 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 NEURL3Q96EH8 262 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 NEDD4LQ96PU5 975 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 C17orf62Q9BQA9 187 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 TAPBPLQ9BX59 468 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 CDCA4Q9BXL8 241 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 MS4A8Q9BY19 250 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 HDAC8Q9BY41 377 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 SLC25A19Q9HC21 320 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 SEMA3GQ9NS98 782 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 DZANK1Q9NVP4 752 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 KCNE3Q9Y6H6 103 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 A0A1W2PP55 124 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 A0A1W2PPV9 198 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 SNPHO15079 494 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 PI15O43692 258 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 OR1F1O43749 312 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 C8orf89P0DMQ9 161 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 PCSK2P16519 638 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 S100A5P33763 92 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 NXNL2Q5VZ03 156 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 PNCKQ6P2M8 343 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 CCBE1Q6UXH8 406 aaPredicted RBP12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 MAPKAP1Q9BPZ7 522 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 TREX2Q9BQ50 279 aaPredicted RBP12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 SNTG1Q9NSN8 517 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 EHD3Q9NZN3 535 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 TRPC4Q9UBN4 977 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 MUTYHQ9UIF7 546 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 LSM2Q9Y333 95 aaKnown RBP12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 TICRRQ7Z2Z1 1910 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 NARSO43776 548 aaKnown RBP12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 GSTT2P0CG29 244 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 GSTT2BP0CG30 244 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 TNFSF8P32971 234 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 TIE1P35590 1138 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 XKP51811 444 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 ZNF91Q05481 1191 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 HYAL1Q12794 435 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 MAP4K2Q12851 820 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 CST6Q15828 149 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 WSCD2Q2TBF2 565 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 LRIT3Q3SXY7 679 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 AGBL4Q5VU57 503 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 LIPKQ5VXJ0 399 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 ACSM5Q6NUN0 579 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 PODNL1Q6PEZ8 512 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 ZNF793Q6ZN11 406 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 ZNF367Q7RTV3 350 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 C17orf64Q86WR6 236 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 ZNF513Q8N8E2 541 aaPredicted RBP12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 FAM46DQ8NEK8 389 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 GPR151Q8TDV0 419 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 MENTQ9BUN1 341 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 ASPNQ9BXN1 380 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 NUAK2Q9H093 628 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 OR51I1Q9H343 314 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 SLC28A3Q9HAS3 691 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 MBNL1Q9NR56 388 aaKnown RBP12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 SPATA7Q9P0W8 599 aa12.75□□□□□ -0.37
GTF2F1-201ENST00000394456 IGKV1-8A0A0C4DH67 115 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 A8MV72 311 aaPredicted RBP12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 CCRL2O00421 344 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 HAT1O14929 419 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 PLD2O14939 933 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 RGS5O15539 181 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 TLX2O43763 284 aaPredicted RBP12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 IFNA14P01570 189 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 APODP05090 189 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 OSMP13725 252 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 CD79BP40259 229 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 CCT3P49368 545 aaKnown RBP12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 CLCNKAP51800 687 aa12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 PCBP4P57723 403 aaKnown RBP12.74□□□□□ -0.37
GTF2F1-201ENST00000394456 HOXC5Q00444 222 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms