RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 YJEFN3A6XGL0 299 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 INPPL1O15357 1258 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 CHRM5P08912 532 aaPredicted RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 ANPEPP15144 967 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 TCN1P20061 433 aaPredicted RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 TKTP29401 623 aaKnown RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 HOXC9P31274 260 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 ACLYP53396 1101 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 ROR2Q01974 943 aaKnown RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 LRRC37A5PQ49AS3 106 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 SEL1L3Q68CR1 1132 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 CDC42EP5Q6NZY7 148 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 TMC8Q8IU68 726 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 MMAAQ8IVH4 418 aaKnown RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 LINC00518Q8N0U6 118 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 TRPV1Q8NER1 839 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 WDR36Q8NI36 951 aaKnown RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 M1APQ8TC57 530 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 GRAMD2BQ96HH9 432 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 RBM4BQ9BQ04 359 aaKnown RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 AIFM2Q9BRQ8 373 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 RBM4Q9BWF3 364 aaKnown RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 MVB12BQ9H7P6 319 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 FZR1Q9UM11 496 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 POLR3HQ9Y535 204 aaPredicted RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 DISP3Q9P2K9 1392 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 TTC37Q6PGP7 1564 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 WDR91A4D1P6 747 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 LATO43561 262 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 H1F0P07305 194 aaKnown RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 DARSP14868 501 aaKnown RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 ABOP16442 354 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 DDX6P26196 483 aaKnown RBP eCLIP3.33□□□□□ -1.88
XRN1-202ENST00000392981 CALML3P27482 149 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 EVI2BP34910 448 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 RPL13AP40429 203 aaKnown RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 PCYT1AP49585 367 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 CKAP4Q07065 602 aaKnown RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 DGCR6Q14129 220 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 VMACQ2NL98 169 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 KLHL40Q2TBA0 621 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 SBK1Q52WX2 424 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 GDF7Q7Z4P5 450 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 CACUL1Q86Y37 369 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 ZNF683Q8IZ20 524 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 OR1L6Q8NGR2 347 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 ARRDC2Q8TBH0 407 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 RAET1EQ8TD07 263 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 CAVIN3Q969G5 261 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 APOLD1Q96LR9 279 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 TRIM9Q9C026 710 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 MTHFD2LQ9H903 347 aaPredicted RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 SLC38A10Q9HBR0 1119 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 DNAJC4Q9NNZ3 241 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 SDHAF3Q9NRP4 125 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 IL20Q9NYY1 176 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 GNG12Q9UBI6 72 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 P2RX2Q9UBL9 471 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 RBMX2Q9Y388 322 aaKnown RBP3.33□□□□□ -1.88
XRN1-202ENST00000392981 USP16Q9Y5T5 823 aa3.33□□□□□ -1.88
XRN1-202ENST00000392981 WRNQ14191 1432 aaPredicted RBP eCLIP3.32□□□□□ -1.88
XRN1-202ENST00000392981 NCAPD2Q15021 1401 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 A0A0A6YYH2 397 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 A6NJ64 397 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 CENPXA8MT69 81 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 RAD51BO15315 384 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 MMP3P08254 477 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 INSRRP14616 1297 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 NQO2P16083 231 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 UCP1P25874 307 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 TRIM23P36406 574 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 BRCC3P46736 316 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 GDI2P50395 445 aaKnown RBP3.32□□□□□ -1.88
XRN1-202ENST00000392981 RCAN2Q14206 197 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 KCNMB1Q16558 191 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 SGSM1Q2NKQ1 1148 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 LSM12Q3MHD2 195 aaKnown RBP3.32□□□□□ -1.88
XRN1-202ENST00000392981 SPATS1Q496A3 300 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 TMEM35AQ53FP2 167 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 NCAPH2Q6IBW4 605 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 SLC22A16Q86VW1 577 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 CBWD2Q8IUF1 395 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 FUNDC1Q8IVP5 155 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 SIAH3Q8IW03 269 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 SNX31Q8N9S9 440 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 OR8K1Q8NGG5 319 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 OR13C9Q8NGT0 318 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 OR5B3Q8NH48 314 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 MAP4K1Q92918 833 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 RAB39BQ96DA2 213 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 CXorf40BQ96DE9 158 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 SLC41A2Q96JW4 573 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 RNF170Q96K19 258 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 FCRL5Q96RD9 977 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 C16orf70Q9BSU1 422 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 COPS4Q9BT78 406 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 APOOQ9BUR5 198 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 ZNF665Q9H7R5 613 aa3.32□□□□□ -1.88
XRN1-202ENST00000392981 TEX10Q9NXF1 929 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms