RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 OR5T3Q8NGG3 340 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 GEMIN6Q8WXD5 167 aaKnown RBP10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 NCSTNQ92542 709 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 TANKQ92844 425 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 MAGED4Q96JG8 741 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 PDE7BQ9NP56 450 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 THSD1Q9NS62 852 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 RAB23Q9ULC3 237 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 PCDHGB5Q9Y5G0 923 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 H0YAE9 185 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 SGK494L7N484 410 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 PLOD2O00469 737 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 ASNA1O43681 348 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 ZBTB11O95625 1053 aaPredicted RBP10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 SNAP29O95721 258 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 PORP16435 677 aaPredicted RBP10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 FPR1P21462 350 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 MYF6P23409 242 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 DNAJA1P31689 397 aaKnown RBP10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 CAPGP40121 348 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 PI4KAP42356 2102 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 PPM1FP49593 454 aaPredicted RBP10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 ARHGDIAP52565 204 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 PRKAG1P54619 331 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 SHC2P98077 582 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 EPS8Q12929 822 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 FAM53BQ14153 422 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 LASP1Q14847 261 aaKnown RBP10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 LTB4RQ15722 352 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 RPS26P11Q5JNZ5 115 aaPredicted RBP10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 GARNL3Q5VVW2 1013 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 NKAIN2Q5VXU1 208 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 C1orf210Q8IVY1 113 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 HS3ST5Q8IZT8 346 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 LGI4Q8N135 537 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 NUP43Q8NFH3 380 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 OR5D16Q8NGK9 328 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 SPPL2AQ8TCT8 520 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 AHCYL2Q96HN2 611 aaKnown RBP10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 NDUFAF4Q9P032 175 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 TRPC4Q9UBN4 977 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 U3KQV3 271 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 TECTAO75443 2155 aa10.76□□□□□ -0.69
SMARCAL1-203ENST00000392128 SCN2AQ99250 2005 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 CCDC88CQ9P219 2028 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 PRAMEF27A3QJZ7 478 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 DUX1O43812 170 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 SLC28A2O43868 658 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 RDH16O75452 317 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 SLITRK5O94991 958 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 DIRAS1O95057 198 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 ATP1B1P05026 303 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 IFI6P09912 130 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 THRBP10828 461 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 ITGA2P17301 1181 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 EPHA8P29322 1005 aaPredicted RBP10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 PPP2R1BP30154 601 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 OR1D5P58170 312 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 ADARB1P78563 741 aaKnown RBP10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 GPLD1P80108 840 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 MYBPC1Q00872 1141 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 CSTF1Q05048 431 aaKnown RBP10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 GNA13Q14344 377 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 INAVAQ3KP66 663 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 TCTE1Q5JU00 501 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 TSEN54Q7Z6J9 526 aaKnown RBP10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 TTC29Q8NA56 475 aaPredicted RBP10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 TMEM52Q8NDY8 209 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 OR9A4Q8NGU2 314 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 XAGE5Q8WWM1 108 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 RASSF5Q8WWW0 418 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 GIMAP5Q96F15 307 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 ZNF347Q96SE7 839 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 ZNF607Q96SK3 696 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 TREX2Q9BQ50 279 aaPredicted RBP10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 REEP1Q9H902 201 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 BCL2L10Q9HD36 194 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 ENAMQ9NRM1 1142 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 SOHLH2Q9NX45 425 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 NLGN3Q9NZ94 848 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 PTGFRNQ9P2B2 879 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 SDK1Q7Z5N4 2213 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 ARID1BQ8NFD5 2236 aaPredicted RBP10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 FITM1A5D6W6 292 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 FGF17O60258 216 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 MFN2O95140 757 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 TNFAIP8O95379 198 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 GPR75O95800 540 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 ALBP02768 609 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 CD247P20963 164 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 MAN2A2P49641 1150 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 CRISP3P54108 245 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 PPP1R8Q12972 351 aaKnown RBP10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 SYPL1Q16563 259 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 PRAMEF8Q5VWM4 474 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 PRAMEF7Q5VXH5 474 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 PEAR1Q5VY43 1037 aaPredicted RBP10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 KRT80Q6KB66 452 aa10.75□□□□□ -0.69
SMARCAL1-203ENST00000392128 KANSL1Q7Z3B3 1105 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms