RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 GRAMD1CQ8IYS0 662 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 LGI3Q8N145 548 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 FAM19A2Q8N3H0 131 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CCDC33Q8N5R6 958 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 Q8N6K4 173 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 MAGEB6Q8N7X4 407 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 TSPYL6Q8N831 410 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 TCEANCQ8N8B7 351 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 PTGR2Q8N8N7 351 aaPredicted RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 FSIP1Q8NA03 581 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ATG16L2Q8NAA4 619 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 COLGALT1Q8NBJ5 622 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 OR2T33Q8NG76 320 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 OR7A2PQ8NGA2 310 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 OR2AP1Q8NGE2 309 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 OR13J1Q8NGT2 312 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 OR9A2Q8NGT5 310 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 OR9A1PQ8NGU1 263 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 HM13Q8TCT9 377 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 COG1Q8WTW3 980 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 RNF139Q8WU17 664 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 DNAJA4Q8WW22 397 aaPredicted RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 POMGNT1Q8WZA1 660 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 IRGQQ8WZA9 623 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CASP10Q92851 521 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 RILPL2Q969X0 211 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 KIF1BPQ96EK5 621 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 C1GALT1C1Q96EU7 318 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 RRNAD1Q96FB5 475 aaKnown RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 LRRC46Q96FV0 321 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 PCED1BQ96HM7 432 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 FAXDC2Q96IV6 333 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 MSLNLQ96KJ4 702 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 RPGRIP1Q96KN7 1286 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 TAAR1Q96RJ0 339 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 SRPK1Q96SB4 655 aaKnown RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ABHD1Q96SE0 405 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 PSMD1Q99460 953 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 RAD9AQ99638 391 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 TMEM121Q9BTD3 319 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 DDX24Q9GZR7 859 aaKnown RBP eCLIP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 INTS2Q9H0H0 1204 aaKnown RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 DPEP2Q9H4A9 486 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 RABEP2Q9H5N1 569 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 SLA2Q9H6Q3 261 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 MAGIXQ9H6Y5 334 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 KAT8Q9H7Z6 458 aaKnown RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 DMAP1Q9NPF5 467 aaPredicted RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 NANSQ9NR45 359 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 RASSF1Q9NS23 344 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 SNTG1Q9NSN8 517 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 DNAJC17Q9NVM6 304 aaKnown RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 SIGLEC8Q9NYZ4 499 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CLIC5Q9NZA1 410 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 MTCH1Q9NZJ7 389 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 RGL1Q9NZL6 768 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 MPP6Q9NZW5 540 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 DOK5Q9P104 306 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNRD1Q9P1U0 126 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CTNNAL1Q9UBT7 734 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 MLXQ9UH92 298 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CHORDC1Q9UHD1 332 aaPredicted RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 DDX20Q9UHI6 824 aaKnown RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC12A6Q9UHW9 1150 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 DAPK2Q9UIK4 370 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF222Q9UK12 451 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 NOCTQ9UK39 431 aaKnown RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 BAG5Q9UL15 447 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CORO1CQ9ULV4 474 aaPredicted RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 NIP7Q9Y221 180 aaKnown RBP eCLIP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 MRPS33Q9Y291 106 aaKnown RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 B3GALT5Q9Y2C3 310 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 RRP7AQ9Y3A4 280 aaKnown RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 FBXO7Q9Y3I1 522 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 HBS1LQ9Y450 684 aaKnown RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 PCDHGA9Q9Y5G4 932 aaKnown RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 PCDHGA8Q9Y5G5 932 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 PCDHGA7Q9Y5G6 932 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 PCDHGA6Q9Y5G7 932 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 PCDHGA3Q9Y5H0 932 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CEPT1Q9Y6K0 416 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 R4GN57 208 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 MYO18BQ8IUG5 2567 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 LTBP1Q14766 1721 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 TECTAO75443 2155 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ASXL3Q9C0F0 2248 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 PTPRQQ9UMZ3 2332 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 MAP1BP46821 2468 aaKnown RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 MICAL3Q7RTP6 2002 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 LAMA2P24043 3122 aaKnown RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 NACADO15069 1562 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 IGHV7-81A0A0B4J1V7 117 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 PRSS51A0A1B0GVH4 220 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 A0A1B0GVI7 797 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 TMEM223A0PJW6 202 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 HYKKA2RU49 373 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 PABPN1LA6NDY0 278 aaKnown RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 TTC36A6NLP5 189 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 A8MWP4 228 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 IGLL5B9A064 214 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms