RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 POPDC3Q9HBV1 291 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 NUDT4Q9NZJ9 180 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 HEY2Q9UBP5 337 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 SUCOQ9UBS9 1254 aaKnown RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 GIMAP2Q9UG22 337 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 PCTPQ9UKL6 214 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 MAPRE3Q9UPY8 281 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 PLLPQ9Y342 182 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 FAM215AQ9Y5M1 114 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 WIF1Q9Y5W5 379 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 NCOA6Q14686 2063 aaPredicted RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 A0A088AWK7 358 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 A0A0A6YYD5 115 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 A0A0G2JNJ9 132 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 C2orf92A0A1B0GVN3 265 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 UBFD1O14562 309 aaKnown RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 KLHL41O60662 606 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 CLDN14O95500 239 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 ESRRBO95718 433 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 CLPSP04118 112 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 IGKV3-11P04433 115 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 P04436 131 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 NR2F6P10588 404 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 ZNF10P21506 573 aaPredicted RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 CNTFP26441 200 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 SLC37A1P57057 533 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 TNFRSF17Q02223 184 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 STX5Q13190 355 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 DUSP8Q13202 625 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 WIPI1Q5MNZ9 446 aaPredicted RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 CLEC6AQ6EIG7 209 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 ARHGAP11AQ6P4F7 1023 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 BNC2Q6ZN30 1099 aaPredicted RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 EXOC3L1Q86VI1 746 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 TMEM200AQ86VY9 491 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 UBQLNLQ8IYU4 475 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 C4orf33Q8N1A6 199 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 TMEM132CQ8N3T6 1108 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 TTLQ8NG68 377 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 CLHC1Q8NHS4 586 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 C16orf52Q8NHV5 167 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 SLC44A1Q8WWI5 657 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 ANKRD7Q92527 254 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 APIPQ96GX9 242 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 EGLN2Q96KS0 407 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 PPP1R36Q96LQ0 422 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 RILPQ96NA2 401 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 FAM129AQ9BZQ8 928 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 EPB41L4BQ9H329 900 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 PFDN4Q9NQP4 134 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 Q9UFV3 132 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 ENTPD4Q9Y227 616 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 KLF13Q9Y2Y9 288 aaPredicted RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 PCDHGA11Q9Y5H2 935 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 CHCHD2Q9Y6H1 151 aaPredicted RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 DNHD1Q96M86 4753 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 GNG14A0A1W2PPG7 69 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 TLDC2A0PJX2 215 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 CCDC189A1A4V9 331 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 TMEM233B4DJY2 109 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 SHISA8B8ZZ34 492 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 DLX3O60479 287 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 NTN1O95631 604 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 GPR75O95800 540 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 JUNP05412 331 aaKnown RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 COX7A2P14406 83 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 ALOX15P16050 662 aaPredicted RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 IL10P22301 178 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 GDF1P27539 372 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 BUD31P41223 144 aaPredicted RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 STT3AP46977 705 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 MASP1P48740 699 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 SERPINB8P50452 374 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 MAPK12P53778 367 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 PLIN5Q00G26 463 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 GALNT1Q10472 559 aaPredicted RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 FRG1Q14331 258 aaKnown RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 EBPQ15125 230 aaKnown RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 KRTCAP3Q53RY4 240 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 SPDYAQ5MJ70 313 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 SLC22A10Q63ZE4 541 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 ALKBH2Q6NS38 261 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 KLC3Q6P597 504 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 RNF111Q6ZNA4 994 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 SEM1Q6ZVN7 128 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 LUZP2Q86TE4 346 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 ZZZ3Q8IYH5 903 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 TCAIMQ8N3R3 496 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 ZNF808Q8N4W9 903 aaPredicted RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 OR9A2Q8NGT5 310 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 FAM57AQ8TBR7 257 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 EFHD2Q96C19 240 aaPredicted RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 KLHL29Q96CT2 875 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 DNAJA3Q96EY1 480 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 CNRIP1Q96F85 164 aaPredicted RBP4.29□□□□□ -1.72
C9orf72-203ENST00000380003 TTYH2Q9BSA4 534 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 ITPAQ9BY32 194 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 RTN4RQ9BZR6 473 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 WWTR1Q9GZV5 400 aa4.29□□□□□ -1.72
C9orf72-203ENST00000380003 OR10A5Q9H207 317 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms