RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 PIP5K1BO14986 540 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 THBS1P07996 1170 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 DRD5P21918 477 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 ADCYAP1R1P41586 468 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 AFF3P51826 1226 aaKnown RBP11.26□□□□□ -0.61
NPHP4-202ENST00000378161 AP1S1P61966 158 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 VGLL4Q14135 290 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 SPHARQ15513 63 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 HEPHL1Q6MZM0 1159 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 FBXO42Q6P3S6 717 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 PLEKHH3Q7Z736 793 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 GPR149Q86SP6 731 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 INO80EQ8NBZ0 244 aaPredicted RBP11.26□□□□□ -0.61
NPHP4-202ENST00000378161 ACOX2Q99424 681 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 TMEM43Q9BTV4 400 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 PINK1Q9BXM7 581 aa11.26□□□□□ -0.61
NPHP4-202ENST00000378161 SEMA4BQ9NPR2 832 aaPredicted RBP11.26□□□□□ -0.61
NPHP4-202ENST00000378161 ADAMTSL3P82987 1691 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 NUDT19A8MXV4 375 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 HSBP1L1C9JCN9 74 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 SLC16A6O15403 523 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 PRAF2O60831 178 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 SERPIND1P05546 499 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 LPLP06858 475 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 GNSP15586 552 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 AGTR1P30556 359 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 PKIAP61925 76 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 HYAL2Q12891 473 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 FAM109BQ6ICB4 259 aaPredicted RBP11.25□□□□□ -0.61
NPHP4-202ENST00000378161 NCEH1Q6PIU2 408 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 TPGS1Q6ZTW0 290 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 PRSS58Q8IYP2 241 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 NKAPQ8N5F7 415 aaKnown RBP11.25□□□□□ -0.61
NPHP4-202ENST00000378161 TAAR8Q969N4 342 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 OR4K3Q96R72 315 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 ADARB2Q9NS39 739 aaKnown RBP11.25□□□□□ -0.61
NPHP4-202ENST00000378161 MS4A12Q9NXJ0 267 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 NDRG2Q9UN36 371 aaKnown RBP11.25□□□□□ -0.61
NPHP4-202ENST00000378161 MYH9P35579 1960 aaKnown RBP11.25□□□□□ -0.61
NPHP4-202ENST00000378161 USP54Q70EL1 1684 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 RPS10-NUDT3A0A1W2PQS6 291 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 ANXA2P2A6NMY6 339 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 FZD6O60353 706 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 CELF2O95319 508 aaKnown RBP11.25□□□□□ -0.61
NPHP4-202ENST00000378161 MLYCDO95822 493 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 VIPP01282 170 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 RPLP2P05387 115 aaKnown RBP11.25□□□□□ -0.61
NPHP4-202ENST00000378161 GPX4P36969 197 aaPredicted RBP11.25□□□□□ -0.61
NPHP4-202ENST00000378161 RPS10P46783 165 aaKnown RBP11.25□□□□□ -0.61
NPHP4-202ENST00000378161 MECP2P51608 486 aaKnown RBP11.25□□□□□ -0.61
NPHP4-202ENST00000378161 WNT3AP56704 352 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 FOXO1Q12778 655 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.25□□□□□ -0.61
NPHP4-202ENST00000378161 LIPKQ5VXJ0 399 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 MARCH9Q86YJ5 346 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 CBLN2Q8IUK8 224 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 PYROXD2Q8N2H3 581 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 KLHL15Q96M94 604 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 AMBRA1Q9C0C7 1298 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 TMEM45AQ9NWC5 275 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 TTC24A2A3L6 582 aaPredicted RBP11.25□□□□□ -0.61
NPHP4-202ENST00000378161 HMX2A2RU54 273 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 ZNF195O14628 629 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 IMPA2O14732 288 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 TNFRSF10BO14763 440 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 PHOX2AO14813 284 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 SCNN1AP37088 669 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 CAMK2GQ13555 558 aaPredicted RBP11.25□□□□□ -0.61
NPHP4-202ENST00000378161 DYRK1AQ13627 763 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 TOMM34Q15785 309 aaPredicted RBP11.25□□□□□ -0.61
NPHP4-202ENST00000378161 HIST2H3PS2Q5TEC6 136 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 RBMS3Q6XE24 437 aaKnown RBP11.25□□□□□ -0.61
NPHP4-202ENST00000378161 CXXC5Q7LFL8 322 aaKnown RBP11.25□□□□□ -0.61
NPHP4-202ENST00000378161 SSX7Q7RTT5 188 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 GPSM1Q86YR5 675 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 LRR1Q96L50 414 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 RIOK2Q9BVS4 552 aaKnown RBP11.25□□□□□ -0.61
NPHP4-202ENST00000378161 COLEC11Q9BWP8 271 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 BCO2Q9BYV7 579 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 FAM50BQ9Y247 325 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 KCNK7Q9Y2U2 307 aa11.25□□□□□ -0.61
NPHP4-202ENST00000378161 TNFRSF11BO00300 401 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 CLDN5O00501 218 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 CLDN4O14493 209 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 QDPRP09417 244 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 ATP5A1P25705 553 aaKnown RBP11.24□□□□□ -0.61
NPHP4-202ENST00000378161 PTPN3P26045 913 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 OR1E1P30953 314 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 PPM1AP35813 382 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 MASP1P48740 699 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 LRRC32Q14392 662 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 GLCCI1Q86VQ1 547 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 KLRG1Q96E93 195 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 ENKD1Q9H0I2 346 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 SLC25A32Q9H2D1 315 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 CCDC86Q9H6F5 360 aaKnown RBP11.24□□□□□ -0.61
NPHP4-202ENST00000378161 TBC1D17Q9HA65 648 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 CALML5Q9NZT1 146 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 GPR160Q9UJ42 338 aa11.24□□□□□ -0.61
NPHP4-202ENST00000378161 RPH3ALQ9UNE2 315 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms