RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 SCML1Q9UN30 329 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 NME7Q9Y5B8 376 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 TNFRSF10BO14763 440 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 KHNYNO15037 678 aaKnown RBP14.34□□□□□ -0.11
NPHP4-201ENST00000378156 CDRT1O95170 752 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 TFAP2AP05549 437 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 HOXD8P13378 290 aaPredicted RBP14.34□□□□□ -0.11
NPHP4-201ENST00000378156 DRD2P14416 443 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 ITGB7P26010 798 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 PDHA2P29803 388 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 AP2S1P53680 142 aaPredicted RBP14.34□□□□□ -0.11
NPHP4-201ENST00000378156 RPS15AP62244 130 aaKnown RBP14.34□□□□□ -0.11
NPHP4-201ENST00000378156 FAM76BQ5HYJ3 339 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 C6orf120Q7Z4R8 191 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 GALNT7Q86SF2 657 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 ZNF676Q8N7Q3 588 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 LHPPQ9H008 270 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 ZNF334Q9HCZ1 680 aaPredicted RBP14.34□□□□□ -0.11
NPHP4-201ENST00000378156 TREM1Q9NP99 234 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 TRIM36Q9NQ86 728 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 POLE4Q9NR33 117 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.34□□□□□ -0.11
NPHP4-201ENST00000378156 NLGN3Q9NZ94 848 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 HCN2Q9UL51 889 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 IFT52Q9Y366 437 aa14.34□□□□□ -0.11
NPHP4-201ENST00000378156 EMC8O43402 210 aa14.33□□□□□ -0.11
NPHP4-201ENST00000378156 LATO43561 262 aa14.33□□□□□ -0.11
NPHP4-201ENST00000378156 DBIP07108 87 aaKnown RBP14.33□□□□□ -0.11
NPHP4-201ENST00000378156 FHP07954 510 aa14.33□□□□□ -0.11
NPHP4-201ENST00000378156 LCN1P31025 176 aa14.33□□□□□ -0.11
NPHP4-201ENST00000378156 DCTP40126 519 aa14.33□□□□□ -0.11
NPHP4-201ENST00000378156 CDH11P55287 796 aa14.33□□□□□ -0.11
NPHP4-201ENST00000378156 PON3Q15166 354 aa14.33□□□□□ -0.11
NPHP4-201ENST00000378156 AAK1Q2M2I8 961 aa14.33□□□□□ -0.11
NPHP4-201ENST00000378156 ZNF782Q6ZMW2 699 aaPredicted RBP14.33□□□□□ -0.11
NPHP4-201ENST00000378156 NUP43Q8NFH3 380 aa14.33□□□□□ -0.11
NPHP4-201ENST00000378156 PROKR2Q8NFJ6 384 aa14.33□□□□□ -0.11
NPHP4-201ENST00000378156 OR4K17Q8NGC6 315 aa14.33□□□□□ -0.11
NPHP4-201ENST00000378156 ZNF675Q8TD23 568 aa14.33□□□□□ -0.11
NPHP4-201ENST00000378156 LGALS12Q96DT0 336 aa14.33□□□□□ -0.11
NPHP4-201ENST00000378156 BARD1Q99728 777 aaKnown RBP14.33□□□□□ -0.11
NPHP4-201ENST00000378156 PRODH2Q9UF12 536 aa14.33□□□□□ -0.11
NPHP4-201ENST00000378156 GPR34Q9UPC5 381 aa14.33□□□□□ -0.11
NPHP4-201ENST00000378156 FXYD6-FXYD2A0A087WZ82 144 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 CDC123O75794 336 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-201ENST00000378156 ETFAP13804 333 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 PORP16435 677 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-201ENST00000378156 GRIN2CQ14957 1233 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 CCSAPQ6IQ19 270 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-201ENST00000378156 PAQR7Q86WK9 346 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 METTL27Q8N6F8 245 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-201ENST00000378156 CSNK1A1LQ8N752 337 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 FXYD6Q9H0Q3 95 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 SAGE1Q9NXZ1 904 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 MROH6A6NGR9 719 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 HK1P19367 917 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 CASRP41180 1078 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 RPS26P62854 115 aaKnown RBP14.33□□□□□ -0.12
NPHP4-201ENST00000378156 SGCBQ16585 318 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 IER5LQ5T953 404 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 RAB12Q6IQ22 244 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 HSD11B1LQ7Z5J1 315 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 PROKR1Q8TCW9 393 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 PAK1IP1Q9NWT1 392 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-201ENST00000378156 CA14Q9ULX7 337 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 A0A075B6Q4 140 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 E7EQ34 232 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 M0R233 179 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 RAB36O95755 333 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 PTNP21246 168 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 SLC14A2Q15849 920 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 GARNL3Q5VVW2 1013 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 NADSYN1Q6IA69 706 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 LIPIQ6XZB0 460 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 HMGN2P46Q86SG4 172 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 AKAP1Q92667 903 aaKnown RBP eCLIP14.33□□□□□ -0.12
NPHP4-201ENST00000378156 FEVQ99581 238 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 MAGIXQ9H6Y5 334 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 ZNF69Q9UC07 566 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 TMEM5Q9Y2B1 443 aa14.33□□□□□ -0.12
NPHP4-201ENST00000378156 INMT-MINDY4F8WBC2 141 aa14.32□□□□□ -0.12
NPHP4-201ENST00000378156 ZNF821O75541 412 aaPredicted RBP14.32□□□□□ -0.12
NPHP4-201ENST00000378156 RNH1P13489 461 aaKnown RBP14.32□□□□□ -0.12
NPHP4-201ENST00000378156 F8A1P23610 371 aa14.32□□□□□ -0.12
NPHP4-201ENST00000378156 GSTM2P28161 218 aa14.32□□□□□ -0.12
NPHP4-201ENST00000378156 HLA-FP30511 346 aa14.32□□□□□ -0.12
NPHP4-201ENST00000378156 TBRG1Q3YBR2 411 aa14.32□□□□□ -0.12
NPHP4-201ENST00000378156 FLYWCH1Q4VC44 716 aa14.32□□□□□ -0.12
NPHP4-201ENST00000378156 TMEM53Q6P2H8 277 aa14.32□□□□□ -0.12
NPHP4-201ENST00000378156 FAM3CQ92520 227 aa14.32□□□□□ -0.12
NPHP4-201ENST00000378156 MYO7AQ13402 2215 aa14.32□□□□□ -0.12
NPHP4-201ENST00000378156 AHSA1O95433 338 aa14.32□□□□□ -0.12
NPHP4-201ENST00000378156 GP1BBP13224 206 aa14.32□□□□□ -0.12
NPHP4-201ENST00000378156 TNFRSF1BP20333 461 aa14.32□□□□□ -0.12
NPHP4-201ENST00000378156 CSNK1DP48730 415 aa14.32□□□□□ -0.12
NPHP4-201ENST00000378156 CLCA4Q14CN2 919 aa14.32□□□□□ -0.12
NPHP4-201ENST00000378156 OR5M3Q8NGP4 307 aa14.32□□□□□ -0.12
NPHP4-201ENST00000378156 OR8K5Q8NH50 307 aa14.32□□□□□ -0.12
NPHP4-201ENST00000378156 HCAR2Q8TDS4 363 aa14.32□□□□□ -0.12
NPHP4-201ENST00000378156 ISL2Q96A47 359 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms