RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 TCTE1Q5JU00 501 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.77□□□□□ -0.21
TCOF1-202ENST00000377797 POC5Q8NA72 575 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 OR10H5Q8NGA6 315 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 NR4A3Q92570 626 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 TBX5Q99593 518 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 POT1Q9NUX5 634 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 PCDHGA4Q9Y5G9 962 aa13.77□□□□□ -0.21
TCOF1-202ENST00000377797 CENPXA8MT69 81 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 MITFO75030 526 aaPredicted RBP13.76□□□□□ -0.21
TCOF1-202ENST00000377797 OR5F1O95221 314 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 HSF5Q4G112 596 aaPredicted RBP13.76□□□□□ -0.21
TCOF1-202ENST00000377797 DCP2Q8IU60 420 aaKnown RBP13.76□□□□□ -0.21
TCOF1-202ENST00000377797 GATSQ8NAP1 163 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 OR2L3Q8NG85 312 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 OR5D16Q8NGK9 328 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 AP3S1Q92572 193 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 CPPED1Q9BRF8 314 aaPredicted RBP13.76□□□□□ -0.21
TCOF1-202ENST00000377797 TBC1D17Q9HA65 648 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 A0A0A6YYC8 382 aaPredicted RBP13.76□□□□□ -0.21
TCOF1-202ENST00000377797 I3L1I5 382 aaPredicted RBP13.76□□□□□ -0.21
TCOF1-202ENST00000377797 FAAHO00519 579 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 RDH16O75452 317 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 CDKN2CP42773 168 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 RBM12BQ8IXT5 1001 aaKnown RBP13.76□□□□□ -0.21
TCOF1-202ENST00000377797 ENKURQ8TC29 256 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 RIT1Q92963 219 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 BORCS5Q969J3 196 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 TUBA8Q9NY65 449 aaPredicted RBP13.76□□□□□ -0.21
TCOF1-202ENST00000377797 MAU2Q9Y6X3 613 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 DICER1Q9UPY3 1922 aaKnown RBP13.76□□□□□ -0.21
TCOF1-202ENST00000377797 EFCAB9A8MZ26 197 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 RPLP0P05388 317 aaKnown RBP13.76□□□□□ -0.21
TCOF1-202ENST00000377797 FESP07332 822 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 NUDT7P0C024 238 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 PRSS36Q5K4E3 855 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 OR13H1Q8NG92 308 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 MRGPRX3Q96LB0 322 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 ZNF354BQ96LW1 612 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 CCDC115Q96NT0 180 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 ACTRT3Q9BYD9 372 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 TIMMDC1Q9NPL8 285 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 NLGN3Q9NZ94 848 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 MAN2B2Q9Y2E5 1009 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 BTBD3Q9Y2F9 522 aa13.76□□□□□ -0.21
TCOF1-202ENST00000377797 CAB39Q9Y376 341 aaPredicted RBP13.76□□□□□ -0.21
TCOF1-202ENST00000377797 SPIN1Q9Y657 262 aaPredicted RBP13.76□□□□□ -0.21
TCOF1-202ENST00000377797 DAPL1A0PJW8 107 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 ACOT8O14734 319 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 BNC1Q01954 994 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 SLC36A3Q495N2 470 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 SLC5A8Q8N695 610 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 ZNF548Q8NEK5 533 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-202ENST00000377797 PHF7Q9BWX1 381 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-202ENST00000377797 MS4A8Q9BY19 250 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 MMP17Q9ULZ9 603 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 MAGED1Q9Y5V3 778 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-202ENST00000377797 CSTAP01040 98 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 CISD3P0C7P0 127 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 C1orf189Q5VU69 101 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 MYBPC1Q00872 1141 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 PIGFQ07326 219 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 CRTC2Q53ET0 693 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-202ENST00000377797 SLC35F1Q5T1Q4 408 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 FAM83HQ6ZRV2 1179 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-202ENST00000377797 MCATQ8IVS2 390 aaKnown RBP13.75□□□□□ -0.21
TCOF1-202ENST00000377797 SLC23A2Q9UGH3 650 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 PPIEQ9UNP9 301 aaKnown RBP13.75□□□□□ -0.21
TCOF1-202ENST00000377797 MYO10Q9HD67 2058 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 SGK494L7N484 410 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 DPP6P42658 865 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 TRA2BP62995 288 aaKnown RBP13.75□□□□□ -0.21
TCOF1-202ENST00000377797 IHHQ14623 411 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 PIP5KL1Q5T9C9 394 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 WDR12Q9GZL7 423 aaKnown RBP13.75□□□□□ -0.21
TCOF1-202ENST00000377797 UBE2ZQ9H832 354 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-202ENST00000377797 LIN28AQ9H9Z2 209 aaKnown RBP13.75□□□□□ -0.21
TCOF1-202ENST00000377797 ZNF624Q9P2J8 865 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-202ENST00000377797 PPIL1Q9Y3C6 166 aa13.75□□□□□ -0.21
TCOF1-202ENST00000377797 A0A0G2JPF8 293 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 HNRNPCL3B7ZW38 293 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 HNRNPCL4P0DMR1 293 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 NDUFV2P19404 249 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 CSNK1EP49674 416 aaKnown RBP13.74□□□□□ -0.21
TCOF1-202ENST00000377797 CDH11P55287 796 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 MRGPRX1Q96LB2 322 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 BRCA1P38398 1863 aaKnown RBP13.74□□□□□ -0.21
TCOF1-202ENST00000377797 TDRD15B5MCY1 1934 aaKnown RBP13.74□□□□□ -0.21
TCOF1-202ENST00000377797 LDB3O75112 727 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 FBLP22087 321 aaKnown RBP13.74□□□□□ -0.21
TCOF1-202ENST00000377797 ACVR2AP27037 513 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 CSNK1G2P78368 415 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 TMEM164Q5U3C3 297 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 LILRA2Q8N149 483 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 IL17RCQ8NAC3 791 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 ZNF300Q96RE9 604 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-202ENST00000377797 TPD52L2O43399 206 aaKnown RBP13.74□□□□□ -0.21
TCOF1-202ENST00000377797 KRT33AO76009 404 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 PYCR3Q53H96 274 aa13.74□□□□□ -0.21
TCOF1-202ENST00000377797 C6orf132Q5T0Z8 1188 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms