RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 EBPQ15125 230 aaKnown RBP19.38■□□□□ 0.69
VSX1-201ENST00000376707 WLSQ5T9L3 541 aa19.38■□□□□ 0.69
VSX1-201ENST00000376707 TTC19Q6DKK2 380 aaPredicted RBP19.38■□□□□ 0.69
VSX1-201ENST00000376707 ADGRD1Q6QNK2 874 aa19.38■□□□□ 0.69
VSX1-201ENST00000376707 TAGAPQ8N103 731 aa19.38■□□□□ 0.69
VSX1-201ENST00000376707 OR10G3Q8NGC4 313 aa19.38■□□□□ 0.69
VSX1-201ENST00000376707 OR52B6Q8NGF0 335 aa19.38■□□□□ 0.69
VSX1-201ENST00000376707 KIF18AQ8NI77 898 aa19.38■□□□□ 0.69
VSX1-201ENST00000376707 TTYH2Q9BSA4 534 aa19.38■□□□□ 0.69
VSX1-201ENST00000376707 NTMT1Q9BV86 223 aa19.38■□□□□ 0.69
VSX1-201ENST00000376707 ZFP64Q9NPA5 681 aa19.38■□□□□ 0.69
VSX1-201ENST00000376707 PCTPQ9UKL6 214 aa19.38■□□□□ 0.69
VSX1-201ENST00000376707 TRIM49D1C9J1S8 452 aa19.37■□□□□ 0.69
VSX1-201ENST00000376707 WDR1O75083 606 aa19.37■□□□□ 0.69
VSX1-201ENST00000376707 SMIM24O75264 130 aa19.37■□□□□ 0.69
VSX1-201ENST00000376707 ABHD2P08910 425 aa19.37■□□□□ 0.69
VSX1-201ENST00000376707 IGFBP2P18065 325 aa19.37■□□□□ 0.69
VSX1-201ENST00000376707 MSX1P28360 303 aa19.37■□□□□ 0.69
VSX1-201ENST00000376707 C10orf62Q5T681 223 aaPredicted RBP19.37■□□□□ 0.69
VSX1-201ENST00000376707 FRG2Q64ET8 278 aa19.37■□□□□ 0.69
VSX1-201ENST00000376707 CEP112Q8N8E3 955 aa19.37■□□□□ 0.69
VSX1-201ENST00000376707 UCN3Q969E3 161 aa19.37■□□□□ 0.69
VSX1-201ENST00000376707 JSRP1Q96MG2 331 aaPredicted RBP19.37■□□□□ 0.69
VSX1-201ENST00000376707 FRG2BQ96QU4 278 aa19.37■□□□□ 0.69
VSX1-201ENST00000376707 MRPL57Q9BQC6 102 aaKnown RBP19.37■□□□□ 0.69
VSX1-201ENST00000376707 ZNF703Q9H7S9 590 aaPredicted RBP19.37■□□□□ 0.69
VSX1-201ENST00000376707 ALKBH4Q9NXW9 302 aa19.37■□□□□ 0.69
VSX1-201ENST00000376707 FAM215AQ9Y5M1 114 aa19.37■□□□□ 0.69
VSX1-201ENST00000376707 CHCHD2Q9Y6H1 151 aaPredicted RBP19.37■□□□□ 0.69
VSX1-201ENST00000376707 DCHS2Q6V1P9 2916 aa19.37■□□□□ 0.69
VSX1-201ENST00000376707 ADGRG4Q8IZF6 3080 aa19.36■□□□□ 0.69
VSX1-201ENST00000376707 C2orf92A0A1B0GVN3 265 aa19.36■□□□□ 0.69
VSX1-201ENST00000376707 PGRMC2O15173 223 aa19.36■□□□□ 0.69
VSX1-201ENST00000376707 RFPL3SP0C7P2 107 aa19.36■□□□□ 0.69
VSX1-201ENST00000376707 GLI4P10075 376 aa19.36■□□□□ 0.69
VSX1-201ENST00000376707 PIK3R1P27986 724 aa19.36■□□□□ 0.69
VSX1-201ENST00000376707 IFT88Q13099 833 aa19.36■□□□□ 0.69
VSX1-201ENST00000376707 HLA-DQA1Q5Y7H0 255 aa19.36■□□□□ 0.69
VSX1-201ENST00000376707 CDH24Q86UP0 819 aa19.36■□□□□ 0.69
VSX1-201ENST00000376707 TMEM151AQ8N4L1 468 aa19.36■□□□□ 0.69
VSX1-201ENST00000376707 DOHHQ9BU89 302 aa19.36■□□□□ 0.69
VSX1-201ENST00000376707 MRPL46Q9H2W6 279 aaKnown RBP19.36■□□□□ 0.69
VSX1-201ENST00000376707 CXorf21Q9HAI6 301 aa19.36■□□□□ 0.69
VSX1-201ENST00000376707 ZBTB26Q9HCK0 441 aa19.36■□□□□ 0.69
VSX1-201ENST00000376707 TEX10Q9NXF1 929 aaPredicted RBP19.36■□□□□ 0.69
VSX1-201ENST00000376707 AHSPQ9NZD4 102 aa19.36■□□□□ 0.69
VSX1-201ENST00000376707 B4GALT7Q9UBV7 327 aa19.36■□□□□ 0.69
VSX1-201ENST00000376707 NFU1Q9UMS0 254 aa19.36■□□□□ 0.69
VSX1-201ENST00000376707 ZNF407Q9C0G0 2248 aa19.36■□□□□ 0.69
VSX1-201ENST00000376707 EXOC1LA0A1B0GW35 172 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 LRRC3CA6NJW4 275 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 CAPN14A8MX76 684 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 LRATO95237 230 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 CLPSP04118 112 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 KLK1P06870 262 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 SNRPAP09012 282 aaKnown RBP19.35■□□□□ 0.69
VSX1-201ENST00000376707 SSTR4P31391 388 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 ZFP36L2P47974 494 aaKnown RBP19.35■□□□□ 0.69
VSX1-201ENST00000376707 TRAF3Q13114 568 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 NTRK2Q16620 822 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 GGTA1PQ4G0N0 100 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 C1orf185Q5T7R7 199 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 C6orf163Q5TEZ5 329 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 RTL6Q6ICC9 239 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 TIFABQ6ZNK6 161 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 TRMT10CQ7L0Y3 403 aaKnown RBP19.35■□□□□ 0.69
VSX1-201ENST00000376707 PAGE2Q7Z2X7 111 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 GALNT12Q8IXK2 581 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 DMRTC2Q8IXT2 367 aaPredicted RBP19.35■□□□□ 0.69
VSX1-201ENST00000376707 IFT20Q8IY31 132 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 LRRC25Q8N386 305 aaPredicted RBP19.35■□□□□ 0.69
VSX1-201ENST00000376707 OR4K14Q8NGD5 310 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 UHMK1Q8TAS1 419 aaKnown RBP19.35■□□□□ 0.69
VSX1-201ENST00000376707 NSUN5Q96P11 429 aaKnown RBP19.35■□□□□ 0.69
VSX1-201ENST00000376707 C1QTNF3Q9BXJ4 246 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 MRPL1Q9BYD6 325 aaKnown RBP19.35■□□□□ 0.69
VSX1-201ENST00000376707 QPCTLQ9NXS2 382 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 SPRR3Q9UBC9 169 aa19.35■□□□□ 0.69
VSX1-201ENST00000376707 CNOT11Q9UKZ1 510 aaKnown RBP19.35■□□□□ 0.69
VSX1-201ENST00000376707 A0A1W2PS29 197 aa19.34■□□□□ 0.69
VSX1-201ENST00000376707 TP53I11O14683 189 aa19.34■□□□□ 0.69
VSX1-201ENST00000376707 RPS17P08708 135 aaKnown RBP19.34■□□□□ 0.69
VSX1-201ENST00000376707 HOXD4P09016 255 aaPredicted RBP19.34■□□□□ 0.69
VSX1-201ENST00000376707 SBK3P0C264 359 aa19.34■□□□□ 0.69
VSX1-201ENST00000376707 GABRA1P14867 456 aa19.34■□□□□ 0.69
VSX1-201ENST00000376707 ENDOUP21128 410 aaKnown RBP19.34■□□□□ 0.69
VSX1-201ENST00000376707 GCAP28676 217 aa19.34■□□□□ 0.69
VSX1-201ENST00000376707 SGO1Q5FBB7 561 aa19.34■□□□□ 0.69
VSX1-201ENST00000376707 TBCELQ5QJ74 424 aa19.34■□□□□ 0.69
VSX1-201ENST00000376707 CCNYL2Q5T2Q4 361 aa19.34■□□□□ 0.69
VSX1-201ENST00000376707 LGSNQ5TDP6 509 aa19.34■□□□□ 0.69
VSX1-201ENST00000376707 TMEM64Q6YI46 380 aa19.34■□□□□ 0.69
VSX1-201ENST00000376707 MILR1Q7Z6M3 343 aa19.34■□□□□ 0.69
VSX1-201ENST00000376707 CLYBLQ8N0X4 340 aa19.34■□□□□ 0.69
VSX1-201ENST00000376707 LIX1Q8N485 282 aa19.34■□□□□ 0.69
VSX1-201ENST00000376707 DIO2Q92813 273 aa19.34■□□□□ 0.69
VSX1-201ENST00000376707 TP53INP1Q96A56 240 aa19.34■□□□□ 0.69
VSX1-201ENST00000376707 SLC6A15Q9H2J7 730 aa19.34■□□□□ 0.69
VSX1-201ENST00000376707 ELOVL6Q9H5J4 265 aa19.34■□□□□ 0.69
VSX1-201ENST00000376707 PROK2Q9HC23 129 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms