RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 SLC6A12P48065 614 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ATAD3CQ5T2N8 411 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 NUDT13Q86X67 352 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 PGBD3Q8N328 593 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SYNPOQ8N3V7 929 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SMPDL3AQ92484 453 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 UCN3Q969E3 161 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ECHDC3Q96DC8 303 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ITPKCQ96DU7 683 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 C7orf34Q96L11 122 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 QRFPRQ96P65 431 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 FAIM2Q9BWQ8 316 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 VN1R3Q9BXE9 311 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 MCUBQ9NWR8 336 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 N6AMT1Q9Y5N5 214 aa13.66□□□□□ -0.22
TNFRSF1B-201ENST00000376259 MPZL2O60487 215 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 RHOP08100 348 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 LAG3P18627 525 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CXCR2P25025 360 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 ACVR1BP36896 505 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SLC9A3P48764 834 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SMIM11AP58511 58 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 TGM3Q08188 693 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 NOGQ13253 232 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 BAK1Q16611 211 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 POMZP3Q6PJE2 187 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 OR51A7Q8NH64 312 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 NEIL3Q8TAT5 605 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 OVCA2Q8WZ82 227 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 C16orf58Q96GQ5 468 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 MAGEB10Q96LZ2 347 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 P2RX2Q9UBL9 471 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 TMPRSS11EQ9UL52 423 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 MAPRE3Q9UPY8 281 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 NPIPA5A0A0B4J1W7 369 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 NPIPA7E9PJI5 369 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 DSCR3O14972 297 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 C1orf105O95561 183 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 PTTG1O95997 202 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 NPIPA8P0DM63 369 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 HOXB6P17509 224 aaKnown RBP13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 RAB33AQ14088 237 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 C2orf27AQ580R0 203 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 PODNL1Q6PEZ8 512 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CYB561A3Q8NBI2 242 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 OR8J1Q8NGP2 316 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 CREBZFQ9NS37 354 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SEC14L4Q9UDX3 406 aa13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 NYNRINQ9P2P1 1898 aaKnown RBP13.65□□□□□ -0.22
TNFRSF1B-201ENST00000376259 SSNA1O43805 119 aa13.65□□□□□ -0.23
TNFRSF1B-201ENST00000376259 OSMP13725 252 aa13.65□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ZNF30P17039 623 aa13.65□□□□□ -0.23
TNFRSF1B-201ENST00000376259 JUNDP17535 347 aa13.65□□□□□ -0.23
TNFRSF1B-201ENST00000376259 INSL4Q14641 139 aa13.65□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ADGRD2Q7Z7M1 963 aa13.65□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TRAM1L1Q8N609 369 aa13.65□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SLC7A13Q8TCU3 470 aa13.65□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SMG7Q92540 1137 aaKnown RBP13.65□□□□□ -0.23
TNFRSF1B-201ENST00000376259 RBCK1Q9BYM8 510 aa13.65□□□□□ -0.23
TNFRSF1B-201ENST00000376259 BHLHE41Q9C0J9 482 aaPredicted RBP13.65□□□□□ -0.23
TNFRSF1B-201ENST00000376259 MVB12BQ9H7P6 319 aa13.65□□□□□ -0.23
TNFRSF1B-201ENST00000376259 STMN3Q9NZ72 180 aa13.65□□□□□ -0.23
TNFRSF1B-201ENST00000376259 NTNG1Q9Y2I2 539 aa13.65□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TBC1D3DA0A087WVF3 549 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TBC1D3IA0A087WXS9 549 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TBC1D3EA0A087X179 549 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TBC1D3KA0A087X1G2 549 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TBC1D3FA6NER0 549 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 LRRC72A6NJI9 287 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TBC1D3LB9A6J9 549 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 FURINP09958 794 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TBC1D3HP0C7X1 549 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 UQCRC2P22695 453 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 FADDQ13158 208 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ARHGEF6Q15052 776 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TBC1D3GQ6DHY5 549 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TBC1D3CQ6IPX1 549 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 GET4Q7L5D6 327 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TBC1D3Q8IZP1 549 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 OR4E2Q8NGC2 313 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 OR14C36Q8NHC7 312 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SMAP2Q8WU79 429 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SLC35B4Q969S0 331 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TREX2Q9BQ50 279 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ELAC1Q9H777 363 aaKnown RBP13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ITGB1BP2Q9UKP3 347 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 OR51B4Q9Y5P0 310 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SCN2AQ99250 2005 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 SPAG17Q6Q759 2223 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TRBV5-3A0A0A0MS03 114 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 HIDE1A8MVS5 230 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 BTN3A3O00478 584 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 RNASET2O00584 256 aaKnown RBP13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 HPGDSO60760 199 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 TGFBR2P37173 567 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 CCR8P51685 355 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 NNATQ16517 81 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 ODF4Q2M2E3 257 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 HYAL4Q2M3T9 481 aa13.64□□□□□ -0.23
TNFRSF1B-201ENST00000376259 BTBD16Q32M84 506 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms