RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 PTPN6P29350 595 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 EFNA3P52797 238 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 MAP4K2Q12851 820 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 DNASE1L3Q13609 305 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 PRICKLE4Q2TBC4 344 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 BHLHB9Q6PI77 547 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 GALNT12Q8IXK2 581 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 RBM15BQ8NDT2 890 aaKnown RBP21.45■■□□□ 1.02
HLA-C-202ENST00000376237 NACC2Q96BF6 587 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 PPWD1Q96BP3 646 aaKnown RBP21.45■■□□□ 1.02
HLA-C-202ENST00000376237 SLC7A6OSQ96CW6 309 aaPredicted RBP21.45■■□□□ 1.02
HLA-C-202ENST00000376237 ELP4Q96EB1 424 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 SH3GL1Q99961 368 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 CXorf36Q9H7Y0 433 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 CXorf21Q9HAI6 301 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 IL1RL2Q9HB29 575 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 SIRT3Q9NTG7 399 aaPredicted RBP21.45■■□□□ 1.02
HLA-C-202ENST00000376237 PTGFRNQ9P2B2 879 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 TCFL5Q9UL49 500 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 SNX8Q9Y5X2 465 aa21.45■■□□□ 1.02
HLA-C-202ENST00000376237 A0A087WV62 115 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 TRBV5-3A0A0A0MS03 114 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 C15orf38-AP3S2A0A0A6YYH1 394 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 MYOCOSA0A1B0GUC4 107 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 GSNP06396 782 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 HOXB9P17482 250 aaPredicted RBP21.44■■□□□ 1.02
HLA-C-202ENST00000376237 TNNI3P19429 210 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 DLSTP36957 453 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 CDK9P50750 372 aaKnown RBP21.44■■□□□ 1.02
HLA-C-202ENST00000376237 SPRED3Q2MJR0 410 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 ZNF628Q5EBL2 1059 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 TMEM205Q6UW68 189 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 DNAJC14Q6Y2X3 702 aaPredicted RBP21.44■■□□□ 1.02
HLA-C-202ENST00000376237 RINLQ6ZS11 566 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 ARPINQ7Z6K5 226 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 PGAM4Q8N0Y7 254 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 IL22RA1Q8N6P7 574 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 CTHRC1Q96CG8 243 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 ANKRD27Q96NW4 1050 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 VAPAQ9P0L0 249 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 MSRB2Q9Y3D2 182 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 PCDHGA6Q9Y5G7 932 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 GMEB1Q9Y692 573 aa21.44■■□□□ 1.02
HLA-C-202ENST00000376237 FXYD1O00168 92 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 TERTO14746 1132 aaKnown RBP21.43■■□□□ 1.02
HLA-C-202ENST00000376237 GYG2O15488 501 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 PLOD3O60568 738 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 PPIBP23284 216 aaKnown RBP21.43■■□□□ 1.02
HLA-C-202ENST00000376237 CPOXP36551 454 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 CCT3P49368 545 aaKnown RBP21.43■■□□□ 1.02
HLA-C-202ENST00000376237 PRR5P85299 388 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 SPDYE7PQ495Y7 208 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 DNAL1Q4LDG9 190 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 C8orf82Q6P1X6 216 aaPredicted RBP21.43■■□□□ 1.02
HLA-C-202ENST00000376237 ANKRD37Q7Z713 158 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 TMEM151BQ8IW70 566 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 ADCY4Q8NFM4 1077 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 SFXN5Q8TD22 340 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 DAZLQ92904 295 aaKnown RBP21.43■■□□□ 1.02
HLA-C-202ENST00000376237 GPATCH1Q9BRR8 931 aaKnown RBP21.43■■□□□ 1.02
HLA-C-202ENST00000376237 BTBD10Q9BSF8 475 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 TRIM4Q9C037 500 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 PNO1Q9NRX1 252 aaKnown RBP21.43■■□□□ 1.02
HLA-C-202ENST00000376237 SLC25A37Q9NYZ2 338 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 MAT2BQ9NZL9 334 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 NTMQ9P121 344 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.43■■□□□ 1.02
HLA-C-202ENST00000376237 CLCA3PQ9Y6N3 262 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 NUP210LQ5VU65 1888 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 SDK2Q58EX2 2172 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 CROCCQ5TZA2 2017 aa21.43■■□□□ 1.02
HLA-C-202ENST00000376237 EMC8O43402 210 aa21.42■■□□□ 1.02
HLA-C-202ENST00000376237 UMODP07911 640 aa21.42■■□□□ 1.02
HLA-C-202ENST00000376237 SOAT1P35610 550 aa21.42■■□□□ 1.02
HLA-C-202ENST00000376237 OR4D2P58180 307 aa21.42■■□□□ 1.02
HLA-C-202ENST00000376237 SLC25A3Q00325 362 aa21.42■■□□□ 1.02
HLA-C-202ENST00000376237 SSPNQ14714 243 aa21.42■■□□□ 1.02
HLA-C-202ENST00000376237 LTB4RQ15722 352 aa21.42■■□□□ 1.02
HLA-C-202ENST00000376237 TBC1D25Q3MII6 688 aa21.42■■□□□ 1.02
HLA-C-202ENST00000376237 RUNDC3AQ59EK9 446 aa21.42■■□□□ 1.02
HLA-C-202ENST00000376237 TMEM107Q6UX40 140 aa21.42■■□□□ 1.02
HLA-C-202ENST00000376237 VWA5B2Q8N398 1253 aa21.42■■□□□ 1.02
HLA-C-202ENST00000376237 OR8J3Q8NGG0 315 aa21.42■■□□□ 1.02
HLA-C-202ENST00000376237 FBXO27Q8NI29 283 aa21.42■■□□□ 1.02
HLA-C-202ENST00000376237 KIAA1143Q96AT1 154 aaPredicted RBP21.42■■□□□ 1.02
HLA-C-202ENST00000376237 SLC35A5Q9BS91 424 aa21.42■■□□□ 1.02
HLA-C-202ENST00000376237 EFHD1Q9BUP0 239 aa21.42■■□□□ 1.02
HLA-C-202ENST00000376237 SLC6A13Q9NSD5 602 aa21.42■■□□□ 1.02
HLA-C-202ENST00000376237 LOC101059948A0A1B0GTJ6 334 aa21.41■■□□□ 1.02
HLA-C-202ENST00000376237 BCAS2O75934 225 aaPredicted RBP21.41■■□□□ 1.02
HLA-C-202ENST00000376237 KRT75O95678 551 aa21.41■■□□□ 1.02
HLA-C-202ENST00000376237 MMP11P24347 488 aa21.41■■□□□ 1.02
HLA-C-202ENST00000376237 MC3RP41968 323 aa21.41■■□□□ 1.02
HLA-C-202ENST00000376237 FOXL2P58012 376 aa21.41■■□□□ 1.02
HLA-C-202ENST00000376237 PSME3P61289 254 aa21.41■■□□□ 1.02
HLA-C-202ENST00000376237 MGAT2Q10469 447 aa21.41■■□□□ 1.02
HLA-C-202ENST00000376237 CAPRIN1Q14444 709 aaKnown RBP21.41■■□□□ 1.02
HLA-C-202ENST00000376237 NANOGP8Q6NSW7 305 aa21.41■■□□□ 1.02
HLA-C-202ENST00000376237 LANCL3Q6ZV70 420 aa21.41■■□□□ 1.02
HLA-C-202ENST00000376237 MSRB3Q8IXL7 192 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms