RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 RNASE6Q93091 150 aaKnown RBP21.31■■□□□ 1
C9orf47-202ENST00000375850 ASB4Q9Y574 426 aa21.31■■□□□ 1
C9orf47-202ENST00000375850 TNPO3Q9Y5L0 923 aaKnown RBP21.31■■□□□ 1
C9orf47-202ENST00000375850 NF1P21359 2839 aa21.3■■□□□ 1
C9orf47-202ENST00000375850 C15orf38-AP3S2A0A0A6YYH1 394 aa21.3■■□□□ 1
C9orf47-202ENST00000375850 FOXE1O00358 373 aaPredicted RBP21.3■■□□□ 1
C9orf47-202ENST00000375850 FAM58BPP0C7Q3 252 aa21.3■■□□□ 1
C9orf47-202ENST00000375850 MTHFD2P13995 350 aa21.3■■□□□ 1
C9orf47-202ENST00000375850 UQCRC1P31930 480 aa21.3■■□□□ 1
C9orf47-202ENST00000375850 CEACAM8P31997 349 aaPredicted RBP21.3■■□□□ 1
C9orf47-202ENST00000375850 BSGP35613 385 aa21.3■■□□□ 1
C9orf47-202ENST00000375850 ALDH18A1P54886 795 aaKnown RBP21.3■■□□□ 1
C9orf47-202ENST00000375850 NRG3P56975 720 aa21.3■■□□□ 1
C9orf47-202ENST00000375850 RPS13P62277 151 aaKnown RBP21.3■■□□□ 1
C9orf47-202ENST00000375850 PPP2R2AP63151 447 aa21.3■■□□□ 1
C9orf47-202ENST00000375850 DUSP8Q13202 625 aa21.3■■□□□ 1
C9orf47-202ENST00000375850 ACSF3Q4G176 576 aaPredicted RBP21.3■■□□□ 1
C9orf47-202ENST00000375850 C10orf62Q5T681 223 aaPredicted RBP21.3■■□□□ 1
C9orf47-202ENST00000375850 OR52E8Q6IFG1 317 aa21.3■■□□□ 1
C9orf47-202ENST00000375850 C17orf47Q8NEP4 570 aa21.3■■□□□ 1
C9orf47-202ENST00000375850 GOT1L1Q8NHS2 421 aaPredicted RBP21.3■■□□□ 1
C9orf47-202ENST00000375850 HSPBAP1Q96EW2 488 aa21.3■■□□□ 1
C9orf47-202ENST00000375850 ZNF717Q9BY31 904 aaPredicted RBP21.3■■□□□ 1
C9orf47-202ENST00000375850 SEMA3DO95025 777 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 GOSR1O95249 250 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 IL2RAP01589 272 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 HPNP05981 417 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 GFAPP14136 432 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 DNASE1P24855 282 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 ACAP2Q15057 778 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 PCBP2Q15366 365 aaKnown RBP eCLIP21.29■■□□□ 1
C9orf47-202ENST00000375850 SEM1Q6ZVN7 128 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 CAMKMTQ7Z624 323 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 PACS2Q86VP3 889 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 ZNF441Q8N8Z8 693 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 NRGNQ92686 78 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 NXNL1Q96CM4 212 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 SH3GL2Q99962 352 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 GPATCH1Q9BRR8 931 aaKnown RBP21.29■■□□□ 1
C9orf47-202ENST00000375850 PRDM14Q9GZV8 571 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 CXorf21Q9HAI6 301 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 CCM2LQ9NUG4 571 aaPredicted RBP21.29■■□□□ 1
C9orf47-202ENST00000375850 ZNF358Q9NW07 568 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 GRHL1Q9NZI5 618 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 CRIM1Q9NZV1 1036 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 UTP11Q9Y3A2 253 aaKnown RBP21.29■■□□□ 1
C9orf47-202ENST00000375850 ZFHX3Q15911 3703 aa21.29■■□□□ 1
C9orf47-202ENST00000375850 A0A1W2PR48 441 aa21.28■■□□□ 1
C9orf47-202ENST00000375850 A6NNC1 897 aa21.28■■□□□ 1
C9orf47-202ENST00000375850 TMPRSS11DO60235 418 aa21.28■■□□□ 1
C9orf47-202ENST00000375850 BMP5P22003 454 aa21.28■■□□□ 1
C9orf47-202ENST00000375850 TRPC1P48995 793 aa21.28■■□□□ 1
C9orf47-202ENST00000375850 CRYZQ08257 329 aaKnown RBP21.28■■□□□ 1
C9orf47-202ENST00000375850 NHSL2Q5HYW2 709 aa21.28■■□□□ 1
C9orf47-202ENST00000375850 C6orf163Q5TEZ5 329 aa21.28■■□□□ 1
C9orf47-202ENST00000375850 KLC3Q6P597 504 aa21.28■■□□□ 1
C9orf47-202ENST00000375850 KIF18BQ86Y91 864 aa21.28■■□□□ 1
C9orf47-202ENST00000375850 GALNT12Q8IXK2 581 aa21.28■■□□□ 1
C9orf47-202ENST00000375850 RNF175Q8N4F7 328 aa21.28■■□□□ 1
C9orf47-202ENST00000375850 L3MBTL4Q8NA19 623 aa21.28■■□□□ 1
C9orf47-202ENST00000375850 RELL2Q8NC24 303 aaPredicted RBP21.28■■□□□ 1
C9orf47-202ENST00000375850 SPATA4Q8NEY3 305 aa21.28■■□□□ 1
C9orf47-202ENST00000375850 SPPL2AQ8TCT8 520 aa21.28■■□□□ 1
C9orf47-202ENST00000375850 ALPK1Q96QP1 1244 aa21.28■■□□□ 1
C9orf47-202ENST00000375850 SERPINI1Q99574 410 aa21.28■■□□□ 1
C9orf47-202ENST00000375850 TIMP4Q99727 224 aa21.28■■□□□ 1
C9orf47-202ENST00000375850 ANGPTL4Q9BY76 406 aa21.28■■□□□ 1
C9orf47-202ENST00000375850 NPFFR2Q9Y5X5 522 aa21.28■■□□□ 1
C9orf47-202ENST00000375850 ANKHD1Q8IWZ3 2542 aaKnown RBP21.28■■□□□ 1
C9orf47-202ENST00000375850 EEDO75530 441 aaKnown RBP21.27■■□□□ 1
C9orf47-202ENST00000375850 PRKRAO75569 313 aaKnown RBP21.27■■□□□ 1
C9orf47-202ENST00000375850 AIFM1O95831 613 aa21.27■■□□□ 1
C9orf47-202ENST00000375850 CLPSP04118 112 aa21.27■■□□□ 1
C9orf47-202ENST00000375850 PIK3R1P27986 724 aa21.27■■□□□ 1
C9orf47-202ENST00000375850 MAGEA4P43358 317 aa21.27■■□□□ 1
C9orf47-202ENST00000375850 MASP1P48740 699 aa21.27■■□□□ 1
C9orf47-202ENST00000375850 CDK9P50750 372 aaKnown RBP21.27■■□□□ 1
C9orf47-202ENST00000375850 FUT7Q11130 342 aa21.27■■□□□ 1
C9orf47-202ENST00000375850 DAZAP2Q15038 168 aaPredicted RBP21.27■■□□□ 1
C9orf47-202ENST00000375850 CPSF6Q16630 551 aaKnown RBP eCLIP21.27■■□□□ 1
C9orf47-202ENST00000375850 PFKFB4Q16877 469 aa21.27■■□□□ 1
C9orf47-202ENST00000375850 NSUN5P2Q63ZY6 315 aa21.27■■□□□ 1
C9orf47-202ENST00000375850 OR7G1Q8NGA0 311 aa21.27■■□□□ 1
C9orf47-202ENST00000375850 FBF1Q8TES7 1133 aa21.27■■□□□ 1
C9orf47-202ENST00000375850 POM121Q96HA1 1249 aa21.27■■□□□ 1
C9orf47-202ENST00000375850 RAB17Q9H0T7 212 aa21.27■■□□□ 1
C9orf47-202ENST00000375850 UBQLN3Q9H347 655 aa21.27■■□□□ 1
C9orf47-202ENST00000375850 IPPKQ9H8X2 491 aa21.27■■□□□ 1
C9orf47-202ENST00000375850 ITPR3Q14573 2671 aa21.27■■□□□ 1
C9orf47-202ENST00000375850 CD8B2A6NJW9 211 aa21.26■□□□□ 0.99
C9orf47-202ENST00000375850 RAD51CO43502 376 aa21.26■□□□□ 0.99
C9orf47-202ENST00000375850 TRAPPC6AO75865 159 aa21.26■□□□□ 0.99
C9orf47-202ENST00000375850 FAM155BO75949 473 aa21.26■□□□□ 0.99
C9orf47-202ENST00000375850 NAGAP17050 411 aa21.26■□□□□ 0.99
C9orf47-202ENST00000375850 PLTPP55058 493 aa21.26■□□□□ 0.99
C9orf47-202ENST00000375850 GTF2H2Q13888 395 aa21.26■□□□□ 0.99
C9orf47-202ENST00000375850 VASNQ6EMK4 673 aa21.26■□□□□ 0.99
C9orf47-202ENST00000375850 GTF2H2CQ6P1K8 395 aa21.26■□□□□ 0.99
C9orf47-202ENST00000375850 CENPLQ8N0S6 344 aaPredicted RBP21.26■□□□□ 0.99
C9orf47-202ENST00000375850 TNIP2Q8NFZ5 429 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms