RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 RGPD5Q99666 1765 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 EFCAB7A8K855 629 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 SLC33A1O00400 549 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-204ENST00000375290 SCGB2A1O75556 95 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 SCG5P05408 212 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 RPS2P15880 293 aaKnown RBP9.75□□□□□ -0.85
PTCH1-204ENST00000375290 HOXC12P31275 282 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 RRAS2P62070 204 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-204ENST00000375290 WDR88Q6ZMY6 472 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 MYOCQ99972 504 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 TMEM185BQ9H7F4 350 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 GMPR2Q9P2T1 348 aaKnown RBP9.75□□□□□ -0.85
PTCH1-204ENST00000375290 PCTPQ9UKL6 214 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 LAMB1P07942 1786 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 AQP9O43315 295 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 DLSTP36957 453 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 ACTR1BP42025 376 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 FLI1Q01543 452 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-204ENST00000375290 RBMS2Q15434 407 aaKnown RBP9.75□□□□□ -0.85
PTCH1-204ENST00000375290 OR2T4Q8NH00 348 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 PIGKQ92643 395 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 BTBD2Q9BX70 525 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 PDGFDQ9GZP0 370 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-204ENST00000375290 GAREM1Q9H706 876 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 ETV7Q9Y603 341 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 HS3ST4Q9Y661 456 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 ATP6V1G2-DDX39BF2Z307 99 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 MITFO75030 526 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-204ENST00000375290 UGT2B7P16662 529 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 DUSP6Q16828 381 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 UBE2NLQ5JXB2 153 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 SHFQ7M4L6 423 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 TMEM203Q969S6 136 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 HRASLS5Q96KN8 279 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 ORAI3Q9BRQ5 295 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 THAP7Q9BT49 309 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-204ENST00000375290 SHOXO15266 292 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 CPNE6O95741 557 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 SYPP08247 313 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 DIO3P55073 304 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 HMGCS1Q01581 520 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 UTS2BQ765I0 119 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 RGL4Q8IZJ4 473 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 CPSF4LA6NMK7 179 aaKnown RBP9.75□□□□□ -0.85
PTCH1-204ENST00000375290 STK25O00506 426 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 KIAA0355O15063 1070 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 GCGRP47871 477 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 FAM214AQ32MH5 1076 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 CEACAM19Q7Z692 300 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 SERINC5Q86VE9 423 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 CD300LFQ8TDQ1 290 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 EIF5A2Q9GZV4 153 aaKnown RBP9.75□□□□□ -0.85
PTCH1-204ENST00000375290 GFOD1Q9NXC2 390 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 LUZP4Q9P127 313 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 PCDHGC4Q9Y5F7 938 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 EDDM13A0A1B0GTR0 161 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 TAS2R20P59543 309 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 RAB4BP61018 213 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 PTPRRQ15256 657 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 RNASE10Q5GAN6 216 aaKnown RBP9.75□□□□□ -0.85
PTCH1-204ENST00000375290 C3orf38Q5JPI3 329 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 CLEC12AQ5QGZ9 265 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 HES5Q5TA89 166 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 CCSAPQ6IQ19 270 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-204ENST00000375290 TMEM173Q86WV6 379 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-204ENST00000375290 NPAS4Q8IUM7 802 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 SRMSQ9H3Y6 488 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 ACSL6Q9UKU0 697 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 KIF13BQ9NQT8 1826 aa9.75□□□□□ -0.85
PTCH1-204ENST00000375290 SRPXP78539 464 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 GHRHRQ02643 423 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 EMX1Q04741 257 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-204ENST00000375290 CHRFAM7AQ494W8 412 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 FUT10Q6P4F1 479 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 IGDCC3Q8IVU1 814 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 LFNGQ8NES3 379 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 OR10A4Q9H209 315 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 NPIPA5E9PKD4 350 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 ADAM12O43184 909 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 SCAF4O95104 1147 aaKnown RBP9.74□□□□□ -0.85
PTCH1-204ENST00000375290 ARHGAP19Q14CB8 494 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 RSU1Q15404 277 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 TMEM236Q5W0B7 351 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 FAM117BQ6P1L5 589 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 ING5Q8WYH8 240 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 ACTR10Q9NZ32 417 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 NPIPA1Q9UND3 350 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 TFPIP10646 304 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 CD34P28906 385 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 PRSS3P35030 304 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 RXFP3Q9NSD7 469 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 C14orf119Q9NWQ9 140 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 TEX10Q9NXF1 929 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-204ENST00000375290 NLKQ9UBE8 527 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 RGPD8O14715 1765 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-204ENST00000375290 LOC730098B7Z3J9 87 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 VILLO15195 856 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 ADAM23O75077 832 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 TSPAN15O95858 294 aa9.74□□□□□ -0.85
PTCH1-204ENST00000375290 AKAIN1P0CW23 69 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms