RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 TMPRSS11DO60235 418 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 KERAO60938 352 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 SUPT3HO75486 399 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 EEDO75530 441 aaKnown RBP12.63□□□□□ -0.39
CXCL12-202ENST00000374426 MTHFD2P13995 350 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 FOSL1P15407 271 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 EPB42P16452 691 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 TACR1P25103 407 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 BSGP35613 385 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 BUD31P41223 144 aaPredicted RBP12.63□□□□□ -0.39
CXCL12-202ENST00000374426 FBXW4P57775 412 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 RPS13P62277 151 aaKnown RBP12.63□□□□□ -0.39
CXCL12-202ENST00000374426 MRPS25P82663 173 aaKnown RBP12.63□□□□□ -0.39
CXCL12-202ENST00000374426 RPS6KA2Q15349 733 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 TBCELQ5QJ74 424 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 NSUN5P2Q63ZY6 315 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 TMEM198Q66K66 360 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 CYS1Q717R9 158 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 CAMKMTQ7Z624 323 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 CMC1Q7Z7K0 106 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 TAGAPQ8N103 731 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 UCN3Q969E3 161 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 LRRC46Q96FV0 321 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 RILPQ96NA2 401 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 CENPKQ9BS16 269 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 PRDM14Q9GZV8 571 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 SAYSD1Q9NPB0 183 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 FOXD3Q9UJU5 478 aaPredicted RBP12.63□□□□□ -0.39
CXCL12-202ENST00000374426 TSC22D4Q9Y3Q8 395 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 IKBKGQ9Y6K9 419 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 KIAA1549Q9HCM3 1950 aa12.63□□□□□ -0.39
CXCL12-202ENST00000374426 TLN2Q9Y4G6 2542 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 C2orf92A0A1B0GVN3 265 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 A0A1W2PS29 197 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 CCDC188H7C350 402 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 TP53I11O14683 189 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 TRAPPC6AO75865 159 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 FAM155BO75949 473 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 ACSL3O95573 720 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 AIFM1O95831 613 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 IL2RAP01589 272 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 HPNP05981 417 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 SLC35E2P0CK97 266 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 NR2F6P10588 404 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 SSTR4P31391 388 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 GALNSP34059 522 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 SPRP35270 261 aaPredicted RBP12.62□□□□□ -0.39
CXCL12-202ENST00000374426 CDK9P50750 372 aaKnown RBP12.62□□□□□ -0.39
CXCL12-202ENST00000374426 ARFIP1P53367 373 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 GPX6P59796 221 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 VASNQ6EMK4 673 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 C3orf62Q6ZUJ4 267 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 MYLK4Q86YV6 388 aaPredicted RBP12.62□□□□□ -0.39
CXCL12-202ENST00000374426 PM20D2Q8IYS1 436 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 TEX9Q8N6V9 391 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 SPPL2AQ8TCT8 520 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 HSPBAP1Q96EW2 488 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 GNRHR2Q96P88 292 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 ANGPTL4Q9BY76 406 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 EPB41L4BQ9H329 900 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 DDX31Q9H8H2 851 aaKnown RBP12.62□□□□□ -0.39
CXCL12-202ENST00000374426 CXorf21Q9HAI6 301 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 NMRAL1Q9HBL8 299 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 LYARQ9NX58 379 aaKnown RBP12.62□□□□□ -0.39
CXCL12-202ENST00000374426 C15orf41Q9Y2V0 281 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 SLC6A5Q9Y345 797 aa12.62□□□□□ -0.39
CXCL12-202ENST00000374426 TUBAL3A6NHL2 446 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 CD8B2A6NJW9 211 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 EIF3HO15372 352 aaKnown RBP eCLIP12.61□□□□□ -0.39
CXCL12-202ENST00000374426 SNX4O95219 450 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 ATE1O95260 518 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 RAF1P04049 648 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 LTA4HP09960 611 aaKnown RBP12.61□□□□□ -0.39
CXCL12-202ENST00000374426 FAM58BPP0C7Q3 252 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 EPXP11678 715 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 PTX3P26022 381 aaPredicted RBP12.61□□□□□ -0.39
CXCL12-202ENST00000374426 AGFG1P52594 562 aaKnown RBP12.61□□□□□ -0.39
CXCL12-202ENST00000374426 SLMAPQ14BN4 828 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 DEFB113Q30KQ7 82 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 NHSL2Q5HYW2 709 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 DCST1Q5T197 706 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 GRTP1Q5TC63 336 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 LIPJQ5W064 366 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 RAPH1Q70E73 1250 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 TBC1D1Q86TI0 1168 aaPredicted RBP12.61□□□□□ -0.39
CXCL12-202ENST00000374426 CTAGE3PQ8IX95 158 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 WFDC11Q8NEX6 87 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 LINC01560Q8TB33 94 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 ADIPOR1Q96A54 375 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 TP53INP1Q96A56 240 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 NTNG2Q96CW9 530 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 SECISBP2Q96T21 854 aaKnown RBP12.61□□□□□ -0.39
CXCL12-202ENST00000374426 KCNF1Q9H3M0 494 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 PLEKHF2Q9H8W4 249 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 ACTR8Q9H981 624 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 SNX15Q9NRS6 342 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 TEX10Q9NXF1 929 aaPredicted RBP12.61□□□□□ -0.39
CXCL12-202ENST00000374426 CAMK2AQ9UQM7 478 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 PCDHGA11Q9Y5H2 935 aa12.61□□□□□ -0.39
CXCL12-202ENST00000374426 NPFFR2Q9Y5X5 522 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms