RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 SH3GLB1Q9Y371 365 aa15.89■□□□□ 0.13
PTPN20-203ENST00000374342 RNF215Q9Y6U7 377 aa15.89■□□□□ 0.13
PTPN20-203ENST00000374342 PCDH15Q96QU1 1955 aa15.89■□□□□ 0.13
PTPN20-203ENST00000374342 PRAMEF27A3QJZ7 478 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 ALDH4A1P30038 563 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 YAP1P46937 504 aaKnown RBP15.88■□□□□ 0.13
PTPN20-203ENST00000374342 SPIBQ01892 262 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 EPS8Q12929 822 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 NKAIN2Q5VXU1 208 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 LYSMD4Q5XG99 296 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 TTC33Q6PID6 262 aaPredicted RBP15.88■□□□□ 0.13
PTPN20-203ENST00000374342 USP51Q70EK9 711 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 TMEM52Q8NDY8 209 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 OR9A4Q8NGU2 314 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 C16orf58Q96GQ5 468 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 TCTN2Q96GX1 697 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 ANKHQ9HCJ1 492 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 THSD1Q9NS62 852 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 DDX18Q9NVP1 670 aaKnown RBP15.88■□□□□ 0.13
PTPN20-203ENST00000374342 KLHL3Q9UH77 587 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 TMEFF2Q9UIK5 374 aaPredicted RBP15.88■□□□□ 0.13
PTPN20-203ENST00000374342 CLCA2Q9UQC9 943 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 TLCD2A6NGC4 264 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 PRAMEF25A6NGN4 478 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 LDB3O75112 727 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 H6PDO95479 791 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 CPMP14384 443 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 ATP6V1B1P15313 513 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 CD247P20963 164 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 ZXDAP98168 799 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 IL1RL1Q01638 556 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 FUT5Q11128 374 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 SRSF5Q13243 272 aaKnown RBP15.88■□□□□ 0.13
PTPN20-203ENST00000374342 KCNAB2Q13303 367 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 FAM111BQ6SJ93 734 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 OLIG3Q7RTU3 272 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 GALNT5Q7Z7M9 940 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 DNAJC22Q8N4W6 341 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 ZNF555Q8NEP9 628 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 OR7G2Q8NG99 324 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 NCSTNQ92542 709 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 COL21A1Q96P44 957 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 ZNF300Q96RE9 604 aaPredicted RBP15.88■□□□□ 0.13
PTPN20-203ENST00000374342 ZNF607Q96SK3 696 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 EPYCQ99645 322 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 TREX2Q9BQ50 279 aaPredicted RBP15.88■□□□□ 0.13
PTPN20-203ENST00000374342 MRPS26Q9BYN8 205 aaKnown RBP15.88■□□□□ 0.13
PTPN20-203ENST00000374342 EXD2Q9NVH0 621 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 IRAK4Q9NWZ3 460 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 C3orf18Q9UK00 162 aa15.88■□□□□ 0.13
PTPN20-203ENST00000374342 H3BNH8 94 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 ADAMDEC1O15204 470 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 FGF17O60258 216 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 DPM1O60762 260 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 MITFO75030 526 aaPredicted RBP15.87■□□□□ 0.13
PTPN20-203ENST00000374342 NME6O75414 186 aaPredicted RBP15.87■□□□□ 0.13
PTPN20-203ENST00000374342 ITGA2P17301 1181 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 PIGAP37287 484 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 MAGEA8P43361 318 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 RAD23AP54725 363 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 EPHA4P54764 986 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 BNIP3Q12983 259 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 DUSP7Q16829 419 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 C6orf132Q5T0Z8 1188 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 MS4A4EQ96PG1 132 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 OR7D2Q96RA2 312 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 ZNF347Q96SE7 839 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 AMBRA1Q9C0C7 1298 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 PRDM9Q9NQV7 894 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 FAM118AQ9NWS6 357 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 LRIT1Q9P2V4 623 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 NINQ8N4C6 2090 aa15.87■□□□□ 0.13
PTPN20-203ENST00000374342 FAM227AF5H4B4 570 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 J3KTA2 159 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 MFN2O95140 757 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 IFNW1P05000 195 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 CTSKP43235 329 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 CRISP3P54108 245 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 CDH12P55289 794 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 TPD52P55327 224 aaPredicted RBP15.86■□□□□ 0.13
PTPN20-203ENST00000374342 RAB38P57729 211 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 PRTGQ2VWP7 1150 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 RFX4Q33E94 735 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 RNF220Q5VTB9 566 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 USP53Q70EK8 1073 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 WDR53Q7Z5U6 358 aaPredicted RBP15.86■□□□□ 0.13
PTPN20-203ENST00000374342 LGI4Q8N135 537 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 ARHGEF39Q8N4T4 335 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 TTC29Q8NA56 475 aaPredicted RBP15.86■□□□□ 0.13
PTPN20-203ENST00000374342 BBS10Q8TAM1 723 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 MIPOL1Q8TD10 442 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 PROX1Q92786 737 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 NRBF2Q96F24 287 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 AHCYL2Q96HN2 611 aaKnown RBP15.86■□□□□ 0.13
PTPN20-203ENST00000374342 MUS81Q96NY9 551 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 RBCK1Q9BYM8 510 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 SEC14L3Q9UDX4 400 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 ZNF451Q9Y4E5 1061 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 LYVE1Q9Y5Y7 322 aa15.86■□□□□ 0.13
PTPN20-203ENST00000374342 SDK1Q7Z5N4 2213 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms