RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 CT62P0C5K7 136 aa17.27■□□□□ 0.36
CDX4-201ENST00000373514 TNNI3P19429 210 aa17.27■□□□□ 0.36
CDX4-201ENST00000373514 GPX3P22352 226 aa17.27■□□□□ 0.36
CDX4-201ENST00000373514 NME5P56597 212 aa17.27■□□□□ 0.36
CDX4-201ENST00000373514 IRX1P78414 480 aaPredicted RBP17.27■□□□□ 0.36
CDX4-201ENST00000373514 RPS6KA2Q15349 733 aa17.27■□□□□ 0.36
CDX4-201ENST00000373514 LTB4RQ15722 352 aa17.27■□□□□ 0.36
CDX4-201ENST00000373514 KBTBD2Q8IY47 623 aa17.27■□□□□ 0.36
CDX4-201ENST00000373514 ST13P4Q8IZP2 240 aaPredicted RBP17.27■□□□□ 0.36
CDX4-201ENST00000373514 MIER2Q8N344 545 aa17.27■□□□□ 0.36
CDX4-201ENST00000373514 KRTCAP2Q8N6L1 136 aa17.27■□□□□ 0.36
CDX4-201ENST00000373514 EXD3Q8N9H8 876 aa17.27■□□□□ 0.36
CDX4-201ENST00000373514 APCDD1LQ8NCL9 501 aa17.27■□□□□ 0.36
CDX4-201ENST00000373514 ZNF681Q96N22 645 aa17.27■□□□□ 0.36
CDX4-201ENST00000373514 ASIC5Q9NY37 505 aa17.27■□□□□ 0.36
CDX4-201ENST00000373514 EIF3LQ9Y262 564 aaKnown RBP17.27■□□□□ 0.36
CDX4-201ENST00000373514 LOC100653049A0A140TA62 436 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 ERVH48-1M5A8F1 160 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 HNRNPCL1O60812 293 aaKnown RBP17.26■□□□□ 0.35
CDX4-201ENST00000373514 CEACAM4O75871 244 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 KRT34O76011 436 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 DDAH2O95865 285 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 SERPINA7P05543 415 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 SLC35E2P0CK97 266 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 MRPL19P49406 292 aaKnown RBP17.26■□□□□ 0.35
CDX4-201ENST00000373514 MAD2L1Q13257 205 aaPredicted RBP17.26■□□□□ 0.35
CDX4-201ENST00000373514 KCNAB2Q13303 367 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 LY6DQ14210 128 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 AGKQ53H12 422 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 FCRLBQ6BAA4 426 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 PAOXQ6QHF9 649 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 GK5Q6ZS86 529 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 SNX32Q86XE0 403 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 B3GNT7Q8NFL0 401 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 OR9I1Q8NGQ6 314 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 OR14A16Q8NHC5 309 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 SLC2A12Q8TD20 617 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 SLC7A6OSQ96CW6 309 aaPredicted RBP17.26■□□□□ 0.35
CDX4-201ENST00000373514 BRINP2Q9C0B6 783 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 OR8D2Q9GZM6 311 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 SLAMF7Q9NQ25 335 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 SDR39U1Q9NRG7 319 aaPredicted RBP17.26■□□□□ 0.35
CDX4-201ENST00000373514 EHD3Q9NZN3 535 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 CLCA3PQ9Y6N3 262 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 SCAMP2O15127 329 aaKnown RBP17.26■□□□□ 0.35
CDX4-201ENST00000373514 PRKNO60260 465 aaPredicted RBP17.26■□□□□ 0.35
CDX4-201ENST00000373514 MAN1A2O60476 641 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 PRPS2P11908 318 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 PORP16435 677 aaPredicted RBP17.26■□□□□ 0.35
CDX4-201ENST00000373514 ST13P50502 369 aaKnown RBP17.26■□□□□ 0.35
CDX4-201ENST00000373514 RASSF2P50749 326 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 GPR143P51810 404 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 EXT1Q16394 746 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 MPEG1Q2M385 716 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 PDCD4Q53EL6 469 aaKnown RBP17.26■□□□□ 0.35
CDX4-201ENST00000373514 B3GNTL1Q67FW5 361 aaPredicted RBP17.26■□□□□ 0.35
CDX4-201ENST00000373514 ADCY4Q8NFM4 1077 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 OR7A2PQ8NGA2 310 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 RP9Q8TA86 221 aaKnown RBP17.26■□□□□ 0.35
CDX4-201ENST00000373514 SUN3Q8TAQ9 357 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 ZNF721Q8TF20 911 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 PSMF1Q92530 271 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 CIDECQ96AQ7 238 aaPredicted RBP17.26■□□□□ 0.35
CDX4-201ENST00000373514 ABHD17AQ96GS6 310 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 RBM18Q96H35 190 aaKnown RBP17.26■□□□□ 0.35
CDX4-201ENST00000373514 NPAS2Q99743 824 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 SLC25A23Q9BV35 468 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 CNPPD1Q9BV87 410 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 LHPPQ9H008 270 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 REEP4Q9H6H4 257 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 ZNF552Q9H707 407 aaPredicted RBP17.26■□□□□ 0.35
CDX4-201ENST00000373514 MMP25Q9NPA2 562 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 SLC35C2Q9NQQ7 365 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 CCDC167Q9P0B6 97 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 PTGFRNQ9P2B2 879 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 ERVK-19Q9WJR5 959 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 ENTPD4Q9Y227 616 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 TP53TG5Q9Y2B4 290 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 ZNF780BQ9Y6R6 833 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 EXPH5Q8NEV8 1989 aa17.26■□□□□ 0.35
CDX4-201ENST00000373514 TRBV11-1A0A0K0K1C0 115 aa17.25■□□□□ 0.35
CDX4-201ENST00000373514 CLPSP04118 112 aa17.25■□□□□ 0.35
CDX4-201ENST00000373514 COX7A2P14406 83 aa17.25■□□□□ 0.35
CDX4-201ENST00000373514 CSNK2A2P19784 350 aaPredicted RBP17.25■□□□□ 0.35
CDX4-201ENST00000373514 EFNA1P20827 205 aaPredicted RBP17.25■□□□□ 0.35
CDX4-201ENST00000373514 NT5EP21589 574 aa17.25■□□□□ 0.35
CDX4-201ENST00000373514 SOX18P35713 384 aa17.25■□□□□ 0.35
CDX4-201ENST00000373514 ASMTP46597 345 aa17.25■□□□□ 0.35
CDX4-201ENST00000373514 SOX8P57073 446 aa17.25■□□□□ 0.35
CDX4-201ENST00000373514 PDE7AQ13946 482 aa17.25■□□□□ 0.35
CDX4-201ENST00000373514 CYLC2Q14093 348 aaPredicted RBP17.25■□□□□ 0.35
CDX4-201ENST00000373514 ZNF267Q14586 743 aaPredicted RBP17.25■□□□□ 0.35
CDX4-201ENST00000373514 MYBPC3Q14896 1274 aa17.25■□□□□ 0.35
CDX4-201ENST00000373514 RINLQ6ZS11 566 aa17.25■□□□□ 0.35
CDX4-201ENST00000373514 LRRC25Q8N386 305 aaPredicted RBP17.25■□□□□ 0.35
CDX4-201ENST00000373514 OR9A2Q8NGT5 310 aa17.25■□□□□ 0.35
CDX4-201ENST00000373514 M1APQ8TC57 530 aa17.25■□□□□ 0.35
CDX4-201ENST00000373514 ELP5Q8TE02 316 aa17.25■□□□□ 0.35
CDX4-201ENST00000373514 DAZLQ92904 295 aaKnown RBP17.25■□□□□ 0.35
CDX4-201ENST00000373514 RIT1Q92963 219 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms