RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 TSPAN8P19075 237 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 DNASE1P24855 282 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 HSD17B3P37058 310 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 BUD31P41223 144 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 RASA2Q15283 850 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 ZNF678Q5SXM1 525 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 NDUFAF5Q5TEU4 345 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 ZZZ3Q8IYH5 903 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 TMEM132CQ8N3T6 1108 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 TRPC4APQ8TEL6 797 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 ASB15Q8WXK1 588 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 NCLNQ969V3 563 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 RMND5BQ96G75 393 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 ALOXE3Q9BYJ1 711 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 TTTY12Q9BZ98 90 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 CLEC4MQ9H2X3 399 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 LIME1Q9H400 295 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 ZNF223Q9UK11 482 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 CLCA3PQ9Y6N3 262 aa17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 PRRC2AP48634 2157 aaKnown RBP17.73■□□□□ 0.43
TRAPPC3-204ENST00000373166 A0A0A6YYD5 115 aa17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 A0A0G2JNJ9 132 aa17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 LDB3O75112 727 aa17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 EEDO75530 441 aaKnown RBP17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 OR2J2O76002 312 aa17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 COX7A2P14406 83 aa17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 BSGP35613 385 aa17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 KIR2DL3P43628 341 aa17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 PRKAA2P54646 552 aa17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 HNRNPH2P55795 449 aaKnown RBP17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 SLC25A35Q3KQZ1 300 aa17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 UNC50Q53HI1 259 aa17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 SGO1Q5FBB7 561 aa17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 LETMD1Q6P1Q0 360 aa17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 IL20RBQ6UXL0 311 aa17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 GK5Q6ZS86 529 aa17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 OR14A16Q8NHC5 309 aa17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 DAZLQ92904 295 aaKnown RBP17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 CCDC126Q96EE4 140 aa17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 ZNF717Q9BY31 904 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 GSX1Q9H4S2 264 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 RPF2Q9H7B2 306 aaKnown RBP17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 DDX31Q9H8H2 851 aaKnown RBP17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 WDR41Q9HAD4 459 aa17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 AHSPQ9NZD4 102 aa17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 Q9UFV3 132 aa17.72■□□□□ 0.43
TRAPPC3-204ENST00000373166 A0A1B0GTL3 188 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 TMEM200CA6NKL6 621 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 FAM47E-STBD1D6RA91 191 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 IGHG3P01860 377 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 FAM58BPP0C7Q3 252 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 NR2F6P10588 404 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 MYL2P10916 166 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 TNNI3P19429 210 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 IMPDH1P20839 514 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 PEX19P40855 299 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 CCT5P48643 541 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 GPR143P51810 404 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 ID2Q02363 134 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 EMBQ6PCB8 327 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 C16orf47Q6ZP98 133 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 GPRIN3Q6ZVF9 776 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 LIX1LQ8IVB5 337 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 FAM109AQ8N4B1 249 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 MORN4Q8NDC4 146 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 GOT1L1Q8NHS2 421 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 SELENOMQ8WWX9 145 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 TANKQ92844 425 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 L3HYPDHQ96EM0 354 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 ALPK1Q96QP1 1244 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 ZNF382Q96SR6 550 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 FAM173AQ9BQD7 235 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 GPATCH1Q9BRR8 931 aaKnown RBP17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 LIN28AQ9H9Z2 209 aaKnown RBP17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 DLL4Q9NR61 685 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 RASSF1Q9NS23 344 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 MYOTQ9UBF9 498 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 VTI1BQ9UEU0 232 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 ACAD8Q9UKU7 415 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 SLC12A4Q9UP95 1085 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 ATG4BQ9Y4P1 393 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 FAM215AQ9Y5M1 114 aa17.71■□□□□ 0.43
TRAPPC3-204ENST00000373166 MYOCOSA0A1B0GUC4 107 aa17.7■□□□□ 0.42
TRAPPC3-204ENST00000373166 A0A1B0GVC2 190 aa17.7■□□□□ 0.42
TRAPPC3-204ENST00000373166 ESPNB1AK53 854 aa17.7■□□□□ 0.42
TRAPPC3-204ENST00000373166 C17orf105B2RV13 164 aa17.7■□□□□ 0.42
TRAPPC3-204ENST00000373166 PPP6CO00743 305 aa17.7■□□□□ 0.42
TRAPPC3-204ENST00000373166 COPEO14579 308 aa17.7■□□□□ 0.42
TRAPPC3-204ENST00000373166 PROM1O43490 865 aa17.7■□□□□ 0.42
TRAPPC3-204ENST00000373166 TMPRSS11DO60235 418 aa17.7■□□□□ 0.42
TRAPPC3-204ENST00000373166 FGF17O60258 216 aa17.7■□□□□ 0.42
TRAPPC3-204ENST00000373166 PRKNO60260 465 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC3-204ENST00000373166 WDR1O75083 606 aa17.7■□□□□ 0.42
TRAPPC3-204ENST00000373166 GLSO94925 669 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC3-204ENST00000373166 OR6B1O95007 311 aa17.7■□□□□ 0.42
TRAPPC3-204ENST00000373166 OR4F21O95013 312 aa17.7■□□□□ 0.42
TRAPPC3-204ENST00000373166 KRT6AP02538 564 aa17.7■□□□□ 0.42
TRAPPC3-204ENST00000373166 KRT6BP04259 564 aa17.7■□□□□ 0.42
TRAPPC3-204ENST00000373166 CNR1P21554 472 aa17.7■□□□□ 0.42
TRAPPC3-204ENST00000373166 KRT6CP48668 564 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms