RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 OR9A2Q8NGT5 310 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 UCK1Q9HA47 277 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 LYVE1Q9Y5Y7 322 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 PRAMEF25A6NGN4 478 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 TNFRSF11BO00300 401 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 SLC16A6O15403 523 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 JRKO75564 520 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 DNAJB5O75953 348 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 CDH3P22223 829 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 DUSP7Q16829 419 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 CYP27C1Q4G0S4 372 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 ARHGAP22Q7Z5H3 698 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 ATG16L2Q8NAA4 619 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 RASSF5Q8WWW0 418 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 ELP4Q96EB1 424 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 EXD2Q9NVH0 621 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 SLC22A7Q9Y694 548 aa23.54■■□□□ 1.36
CTSA-203ENST00000372459 MITFO75030 526 aaPredicted RBP23.53■■□□□ 1.36
CTSA-203ENST00000372459 MFN2O95140 757 aa23.53■■□□□ 1.36
CTSA-203ENST00000372459 HMGN2P05204 90 aaKnown RBP23.53■■□□□ 1.36
CTSA-203ENST00000372459 NR2F1P10589 423 aa23.53■■□□□ 1.36
CTSA-203ENST00000372459 ST6GAL1P15907 406 aa23.53■■□□□ 1.36
CTSA-203ENST00000372459 VSX2P58304 361 aaPredicted RBP23.53■■□□□ 1.36
CTSA-203ENST00000372459 NXPH1P58417 271 aa23.53■■□□□ 1.36
CTSA-203ENST00000372459 HNRNPKP61978 463 aaKnown RBP eCLIP23.53■■□□□ 1.361e-14■■□□□ 14.4
CTSA-203ENST00000372459 SPIBQ01892 262 aa23.53■■□□□ 1.36
CTSA-203ENST00000372459 KCNC4Q03721 635 aa23.53■■□□□ 1.36
CTSA-203ENST00000372459 SIM2Q14190 667 aaPredicted RBP23.53■■□□□ 1.36
CTSA-203ENST00000372459 LASP1Q14847 261 aaKnown RBP23.53■■□□□ 1.36
CTSA-203ENST00000372459 GALNT5Q7Z7M9 940 aa23.53■■□□□ 1.36
CTSA-203ENST00000372459 ERI1Q8IV48 349 aaKnown RBP23.53■■□□□ 1.36
CTSA-203ENST00000372459 LRRC25Q8N386 305 aaPredicted RBP23.53■■□□□ 1.36
CTSA-203ENST00000372459 OR4K14Q8NGD5 310 aa23.53■■□□□ 1.36
CTSA-203ENST00000372459 MIPOL1Q8TD10 442 aa23.53■■□□□ 1.36
CTSA-203ENST00000372459 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.53■■□□□ 1.36
CTSA-203ENST00000372459 MRPS2Q9Y399 296 aaKnown RBP23.53■■□□□ 1.36
CTSA-203ENST00000372459 FAM32AQ9Y421 112 aaKnown RBP23.53■■□□□ 1.36
CTSA-203ENST00000372459 SPACA6W5XKT8 324 aa23.53■■□□□ 1.36
CTSA-203ENST00000372459 UGT2B11O75310 529 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 IFNW1P05000 195 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 PCSK6P29122 969 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 MC3RP41968 323 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 CXCL12P48061 93 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 RPS6KA3P51812 740 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 IL1RL1Q01638 556 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 IL18R1Q13478 541 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 GNA13Q14344 377 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 SYPL1Q16563 259 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 FAHD1Q6P587 224 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 C19orf47Q8N9M1 422 aaKnown RBP23.52■■□□□ 1.36
CTSA-203ENST00000372459 NUP43Q8NFH3 380 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 CSF3RQ99062 836 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 TREX2Q9BQ50 279 aaPredicted RBP23.52■■□□□ 1.36
CTSA-203ENST00000372459 DNAAF2Q9NVR5 837 aaKnown RBP23.52■■□□□ 1.36
CTSA-203ENST00000372459 GON4LQ3T8J9 2241 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 AQP9O43315 295 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 SERPINB7O75635 380 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 CD247P20963 164 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 XCR1P46094 333 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 XKP51811 444 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 CRISP3P54108 245 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 CDH15P55291 814 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 C1orf216Q8TAB5 229 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 PROX1Q92786 737 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 SLC38A3Q99624 504 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 PIP5K1AQ99755 562 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 KRT84Q9NSB2 600 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 DDX18Q9NVP1 670 aaKnown RBP23.52■■□□□ 1.36
CTSA-203ENST00000372459 ENPP4Q9Y6X5 453 aa23.52■■□□□ 1.36
CTSA-203ENST00000372459 PRAMEF27A3QJZ7 478 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 LILRA5A6NI73 299 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 YAP1P46937 504 aaKnown RBP23.51■■□□□ 1.35
CTSA-203ENST00000372459 OLR1P78380 273 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 SIM1P81133 766 aaPredicted RBP23.51■■□□□ 1.35
CTSA-203ENST00000372459 KRT73Q86Y46 540 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 UBALD2Q8IYN6 164 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 SDR16C5Q8N3Y7 309 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 TMIGD2Q96BF3 282 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 YIPF4Q9BSR8 244 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 RIBC2Q9H4K1 309 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 PCDHGA8Q9Y5G5 932 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 ZNF860A6NHJ4 632 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 ZNF701M0R085 212 aaPredicted RBP23.51■■□□□ 1.35
CTSA-203ENST00000372459 BCKDKO14874 412 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 DNAJB6O75190 326 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 RHCEP18577 417 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 CAPZBP47756 277 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 CDH12P55289 794 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 ZNF691Q5VV52 312 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 GPR153Q6NV75 609 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 PRSS41Q7RTY9 318 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 TMEFF1Q8IYR6 380 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 BBS10Q8TAM1 723 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 GIPC3Q8TF64 312 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 COL21A1Q96P44 957 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 FAM60AQ9NP50 221 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 SEC14L3Q9UDX4 400 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 SIT1Q9Y3P8 196 aa23.51■■□□□ 1.35
CTSA-203ENST00000372459 NAALAD2Q9Y3Q0 740 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms