RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 DPM1O60762 260 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 PSIP1O75475 530 aaKnown RBP9.81□□□□□ -0.84
COL5A1-202ENST00000371820 STK16O75716 305 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 CCNDBP1O95273 360 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 CLDN9O95484 217 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 BCL10O95999 233 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 CST1P01037 141 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 EEF1B2P24534 225 aaKnown RBP9.81□□□□□ -0.84
COL5A1-202ENST00000371820 S100A3P33764 101 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 CASP2P42575 452 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 ZFP36L2P47974 494 aaKnown RBP9.81□□□□□ -0.84
COL5A1-202ENST00000371820 GABRA4P48169 554 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 SERPINB10P48595 397 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 RRADP55042 308 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 CLDN8P56748 225 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 RPS18P62269 152 aaKnown RBP9.81□□□□□ -0.84
COL5A1-202ENST00000371820 DCDP81605 110 aaKnown RBP9.81□□□□□ -0.84
COL5A1-202ENST00000371820 OCA2Q04671 838 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 SRSF11Q05519 484 aaKnown RBP9.81□□□□□ -0.84
COL5A1-202ENST00000371820 KLRB1Q12918 225 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 GK3PQ14409 553 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 GRM7Q14831 915 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 ZIC1Q15915 447 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 IGFBP7Q16270 282 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 CYP2A13Q16696 494 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 FAM214AQ32MH5 1076 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 PTCHD3Q3KNS1 767 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 TIGD2Q4W5G0 525 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 C10orf62Q5T681 223 aaPredicted RBP9.81□□□□□ -0.84
COL5A1-202ENST00000371820 FIGLAQ6QHK4 219 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 FAM198BQ6UWH4 519 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 KCTD8Q6ZWB6 473 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 STK32CQ86UX6 486 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 MCATQ8IVS2 390 aaKnown RBP9.81□□□□□ -0.84
COL5A1-202ENST00000371820 CPNE9Q8IYJ1 553 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 MICU2Q8IYU8 434 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 C2orf73Q8N5S3 287 aaPredicted RBP9.81□□□□□ -0.84
COL5A1-202ENST00000371820 ZNF655Q8N720 491 aaPredicted RBP9.81□□□□□ -0.84
COL5A1-202ENST00000371820 FBXO15Q8NCQ5 510 aaPredicted RBP9.81□□□□□ -0.84
COL5A1-202ENST00000371820 FNDC8Q8TC99 324 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 SMPDL3AQ92484 453 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 FAM162AQ96A26 154 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 ZNF583Q96ND8 569 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 IL17FQ96PD4 163 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 KCNA7Q96RP8 456 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 SLC30A3Q99726 388 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 SLC39A3Q9BRY0 314 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 AKIRIN1Q9H9L7 192 aaPredicted RBP9.81□□□□□ -0.84
COL5A1-202ENST00000371820 LRTM1Q9HBL6 345 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 CCNB1IP1Q9NPC3 277 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 GIN1Q9NXP7 522 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 SCN3BQ9NY72 215 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 WWOXQ9NZC7 414 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 PSME2Q9UL46 239 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 PCDHGB1Q9Y5G3 927 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 KLK4Q9Y5K2 254 aa9.81□□□□□ -0.84
COL5A1-202ENST00000371820 SPENQ96T58 3664 aaKnown RBP9.81□□□□□ -0.84
COL5A1-202ENST00000371820 LRRC14BA6NHZ5 514 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 ARHGEF33A8MVX0 844 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 H3BMH7 237 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 CXCR6O00574 342 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 ANKRD28O15084 1053 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 PRICKLE3O43900 615 aaPredicted RBP9.8□□□□□ -0.84
COL5A1-202ENST00000371820 TPST1O60507 370 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 SEC22BO75396 215 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 RSL1D1O76021 490 aaKnown RBP9.8□□□□□ -0.84
COL5A1-202ENST00000371820 SEC14L2O76054 403 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 SEC24DO94855 1032 aaPredicted RBP9.8□□□□□ -0.84
COL5A1-202ENST00000371820 ALPLP05186 524 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 PGRP06401 933 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 FURINP09958 794 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 ERGP11308 486 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 G6PDP11413 515 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 PTX3P26022 381 aaPredicted RBP9.8□□□□□ -0.84
COL5A1-202ENST00000371820 FOLR3P41439 243 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 PNLIPRP1P54315 467 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 AP1S2P56377 157 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 MVKQ03426 396 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 SP140Q13342 867 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 RABL3Q5HYI8 236 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 C6orf141Q5SZD1 244 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 LRIF1Q5T3J3 769 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 MLIPQ5VWP3 458 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 ZNF385CQ66K41 422 aaPredicted RBP9.8□□□□□ -0.84
COL5A1-202ENST00000371820 TCTN3Q6NUS6 607 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 MED25Q71SY5 747 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 LRRC70Q7Z2Q7 622 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 ZNF554Q86TJ5 538 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 EPHX4Q8IUS5 362 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 ZCCHC7Q8N3Z6 543 aaKnown RBP9.8□□□□□ -0.84
COL5A1-202ENST00000371820 SVOPQ8N4V2 548 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 VPS37AQ8NEZ2 397 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 OR2L3Q8NG85 312 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 OR13F1Q8NGS4 319 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 GTF2H4Q92759 462 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 ZNF566Q969W8 418 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 TMBIM1Q969X1 311 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 MIB2Q96AX9 1013 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 FKBP10Q96AY3 582 aa9.8□□□□□ -0.84
COL5A1-202ENST00000371820 TESCQ96BS2 214 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms