RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 ADAM23O75077 832 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 PEX14O75381 377 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 PTHP01270 115 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 IGFBP4P22692 258 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 CHMP24386 653 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 IDUAP35475 653 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 SEPHS1P49903 392 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 ZNF33BQ06732 778 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 PROX2Q3B8N5 592 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 DCST1Q5T197 706 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 CCNJQ5T5M9 372 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 MTSS1LQ765P7 747 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 SHFQ7M4L6 423 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 CAMKMTQ7Z624 323 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 TCEANCQ8N8B7 351 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 B3GNT7Q8NFL0 401 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 OR2L3Q8NG85 312 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 WDR36Q8NI36 951 aaKnown RBP11.11□□□□□ -0.63
PDE6C-201ENST00000371447 LGALS12Q96DT0 336 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 CNRIP1Q96F85 164 aaPredicted RBP11.11□□□□□ -0.63
PDE6C-201ENST00000371447 MAPKAP1Q9BPZ7 522 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 TUBA1CQ9BQE3 449 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 SIRT3Q9NTG7 399 aaPredicted RBP11.11□□□□□ -0.63
PDE6C-201ENST00000371447 ENTPD4Q9Y227 616 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 HELZP42694 1942 aaKnown RBP11.11□□□□□ -0.63
PDE6C-201ENST00000371447 ALPK2Q86TB3 2170 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 AIREO43918 545 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 AIFM1O95831 613 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 RPA4Q13156 261 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 KEAP1Q14145 624 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 DEFB110Q30KQ9 67 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 PRRT3Q5FWE3 981 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 TCTN3Q6NUS6 607 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 ZC3H14Q6PJT7 736 aaKnown RBP11.11□□□□□ -0.63
PDE6C-201ENST00000371447 NANOGNBQ7Z5D8 188 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 SLC34A3Q8N130 599 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 PSMA8Q8TAA3 256 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 TMEM203Q969S6 136 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 RELTQ969Z4 430 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 WDR34Q96EX3 536 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 AMDHD1Q96NU7 426 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 OR5M11Q96RB7 305 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 MENTQ9BUN1 341 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 FNDC11Q9BVV2 318 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 DUSP21Q9H596 190 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 ZNF226Q9NYT6 803 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 SLC13A4Q9UKG4 626 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 CLCA2Q9UQC9 943 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 PRSS38A1L453 326 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 BOLA2-SMG1P6H3BVE0 249 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 ADH1BP00325 375 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 ANXA8P13928 327 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 GGT2P36268 569 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 KIR2DL1P43626 348 aaPredicted RBP11.11□□□□□ -0.63
PDE6C-201ENST00000371447 REEP5Q00765 189 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 IQCHQ86VS3 1027 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 AMIGO1Q86WK6 493 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 RPLP0P6Q8NHW5 317 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 DTNBP1Q96EV8 351 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 HRASLS5Q96KN8 279 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 Q96MT0 163 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 QRFPRQ96P65 431 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 ZNF347Q96SE7 839 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 POLR2J3Q9H1A7 115 aaKnown RBP11.11□□□□□ -0.63
PDE6C-201ENST00000371447 TCEAL2Q9H3H9 227 aaPredicted RBP11.11□□□□□ -0.63
PDE6C-201ENST00000371447 APOBEC3BQ9UH17 382 aaKnown RBP11.11□□□□□ -0.63
PDE6C-201ENST00000371447 MSRAQ9UJ68 235 aa11.11□□□□□ -0.63
PDE6C-201ENST00000371447 COL6A3P12111 3177 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 NPIPA5A0A0B4J1W7 369 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 OR2W5A6NFC9 320 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 NPIPA7E9PJI5 369 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 TLX2O43763 284 aaPredicted RBP11.1□□□□□ -0.63
PDE6C-201ENST00000371447 HYAL3O43820 417 aaPredicted RBP11.1□□□□□ -0.63
PDE6C-201ENST00000371447 CDC123O75794 336 aaPredicted RBP11.1□□□□□ -0.63
PDE6C-201ENST00000371447 OCM2P0CE71 109 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 OCMP0CE72 109 aaPredicted RBP11.1□□□□□ -0.63
PDE6C-201ENST00000371447 ZNF888P0CJ79 500 aaPredicted RBP11.1□□□□□ -0.63
PDE6C-201ENST00000371447 NPIPA8P0DM63 369 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 ITIH1P19827 911 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 HIST1H1TP22492 207 aaPredicted RBP11.1□□□□□ -0.63
PDE6C-201ENST00000371447 PPP2R1BP30154 601 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 XCR1P46094 333 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 ZC3H12BQ5HYM0 836 aaKnown RBP11.1□□□□□ -0.63
PDE6C-201ENST00000371447 RTL10Q7L3V2 364 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 OR6T1Q8NGN1 323 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 TMEM74BQ9NUR3 256 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 MAPRE3Q9UPY8 281 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 OR6C74A6NCV1 312 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 WWP2O00308 870 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 FCMRO60667 390 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 LDB3O75112 727 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 ENTPD6O75354 484 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 UGT2B17O75795 530 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 H1F0P07305 194 aaKnown RBP11.1□□□□□ -0.63
PDE6C-201ENST00000371447 JUNBP17275 347 aaPredicted RBP11.1□□□□□ -0.63
PDE6C-201ENST00000371447 PEBP1P30086 187 aaKnown RBP11.1□□□□□ -0.63
PDE6C-201ENST00000371447 TRIM23P36406 574 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 CDC42P60953 191 aa11.1□□□□□ -0.63
PDE6C-201ENST00000371447 EEF1A2Q05639 463 aaKnown RBP11.1□□□□□ -0.63
PDE6C-201ENST00000371447 IL18R1Q13478 541 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms