RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 TUBA1AQ71U36 451 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 LACC1Q8IV20 430 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 KCNK12Q9HB15 430 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 C11orf16Q9NQ32 467 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 SPHK1Q9NYA1 384 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 ATG4BQ9Y4P1 393 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 TBC1D3DA0A087WVF3 549 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 TBC1D3IA0A087WXS9 549 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 TBC1D3EA0A087X179 549 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 TBC1D3KA0A087X1G2 549 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 TBC1D3FA6NER0 549 aaPredicted RBP27.34■■□□□ 1.97
SSBP3-204ENST00000371320 TBC1D3LB9A6J9 549 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 CNOT3O75175 753 aaKnown RBP27.34■■□□□ 1.97
SSBP3-204ENST00000371320 TBC1D3HP0C7X1 549 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 ATP5A1P25705 553 aaKnown RBP27.34■■□□□ 1.97
SSBP3-204ENST00000371320 UGT2B10P36537 528 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 GPR19Q15760 415 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 INAQ16352 499 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 TBC1D3GQ6DHY5 549 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 TBC1D3CQ6IPX1 549 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 TBC1D3Q8IZP1 549 aaPredicted RBP27.34■■□□□ 1.97
SSBP3-204ENST00000371320 MFSD4AQ8N468 514 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 CNOT2Q9NZN8 540 aaKnown RBP27.34■■□□□ 1.97
SSBP3-204ENST00000371320 ACAD8Q9UKU7 415 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 SLC31A1O15431 190 aa27.33■■□□□ 1.97
SSBP3-204ENST00000371320 LINC01565O15544 149 aa27.33■■□□□ 1.97
SSBP3-204ENST00000371320 BMP4P12644 408 aa27.33■■□□□ 1.97
SSBP3-204ENST00000371320 PEBP1P30086 187 aaKnown RBP27.33■■□□□ 1.97
SSBP3-204ENST00000371320 PTGER1P34995 402 aa27.33■■□□□ 1.97
SSBP3-204ENST00000371320 UGT2B15P54855 530 aa27.33■■□□□ 1.97
SSBP3-204ENST00000371320 ILKQ13418 452 aa27.33■■□□□ 1.97
SSBP3-204ENST00000371320 ARMCX4Q5H9R4 360 aa27.33■■□□□ 1.97
SSBP3-204ENST00000371320 OR2L5Q8NG80 312 aa27.33■■□□□ 1.97
SSBP3-204ENST00000371320 C9orf43Q8TAL5 461 aaPredicted RBP27.33■■□□□ 1.97
SSBP3-204ENST00000371320 OTUB1Q96FW1 271 aaPredicted RBP27.33■■□□□ 1.97
SSBP3-204ENST00000371320 ARMC7Q9H6L4 198 aa27.33■■□□□ 1.97
SSBP3-204ENST00000371320 SCHIP1Q9P0W5 487 aaPredicted RBP27.33■■□□□ 1.97
SSBP3-204ENST00000371320 FBXW2Q9UKT8 454 aa27.33■■□□□ 1.97
SSBP3-204ENST00000371320 DOCK8Q8NF50 2099 aa27.33■■□□□ 1.97
SSBP3-204ENST00000371320 TLR4O00206 839 aa27.32■■□□□ 1.96
SSBP3-204ENST00000371320 CRISP3P54108 245 aa27.32■■□□□ 1.96
SSBP3-204ENST00000371320 ADPRHP54922 357 aa27.32■■□□□ 1.96
SSBP3-204ENST00000371320 MRM1Q6IN84 353 aaKnown RBP27.32■■□□□ 1.96
SSBP3-204ENST00000371320 BHLHB9Q6PI77 547 aa27.32■■□□□ 1.96
SSBP3-204ENST00000371320 TMEM64Q6YI46 380 aa27.32■■□□□ 1.96
SSBP3-204ENST00000371320 YIPF4Q9BSR8 244 aa27.32■■□□□ 1.96
SSBP3-204ENST00000371320 PBX4Q9BYU1 374 aa27.32■■□□□ 1.96
SSBP3-204ENST00000371320 UGT2B17O75795 530 aa27.32■■□□□ 1.96
SSBP3-204ENST00000371320 SOX14O95416 240 aa27.32■■□□□ 1.96
SSBP3-204ENST00000371320 RPLP0P05388 317 aaKnown RBP27.32■■□□□ 1.96
SSBP3-204ENST00000371320 ALPPL2P10696 532 aa27.32■■□□□ 1.96
SSBP3-204ENST00000371320 CMPK1P30085 196 aa27.32■■□□□ 1.96
SSBP3-204ENST00000371320 ANXA11P50995 505 aaKnown RBP27.32■■□□□ 1.96
SSBP3-204ENST00000371320 OLR1P78380 273 aa27.32■■□□□ 1.96
SSBP3-204ENST00000371320 CCDC116Q8IYX3 515 aa27.32■■□□□ 1.96
SSBP3-204ENST00000371320 BBS10Q8TAM1 723 aa27.32■■□□□ 1.96
SSBP3-204ENST00000371320 JPH3Q8WXH2 748 aaPredicted RBP27.32■■□□□ 1.96
SSBP3-204ENST00000371320 IL4I1Q96RQ9 567 aa27.32■■□□□ 1.96
SSBP3-204ENST00000371320 CDCA4Q9BXL8 241 aa27.32■■□□□ 1.96
SSBP3-204ENST00000371320 ANKHQ9HCJ1 492 aa27.32■■□□□ 1.96
SSBP3-204ENST00000371320 FGF22Q9HCT0 170 aa27.32■■□□□ 1.96
SSBP3-204ENST00000371320 KLHL20Q9Y2M5 609 aa27.32■■□□□ 1.96
SSBP3-204ENST00000371320 M0R3H8 397 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 LAMP2P13473 410 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 NTSR1P30989 418 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 PIN1Q13526 163 aaPredicted RBP27.31■■□□□ 1.96
SSBP3-204ENST00000371320 ZNF750Q32MQ0 723 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 PGBD2Q6P3X8 592 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 OLIG3Q7RTU3 272 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 COMTD1Q86VU5 262 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 MCFD2Q8NI22 146 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 SFXN5Q8TD22 340 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 CNRIP1Q96F85 164 aaPredicted RBP27.31■■□□□ 1.96
SSBP3-204ENST00000371320 SPATA5L1Q9BVQ7 753 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 POLR2J3Q9H1A7 115 aaKnown RBP27.31■■□□□ 1.96
SSBP3-204ENST00000371320 A4GNTQ9UNA3 340 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 ENTPD4Q9Y227 616 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 HEBP2Q9Y5Z4 205 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 H3BN98 237 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 KPNA4O00629 521 aaPredicted RBP27.31■■□□□ 1.96
SSBP3-204ENST00000371320 KDM1AO60341 852 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 AIFM1O95831 613 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 IGFBP1P08833 259 aaPredicted RBP27.31■■□□□ 1.96
SSBP3-204ENST00000371320 HSMCR30P0CW71 290 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 MAGEA8P43361 318 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 USP43Q70EL4 1123 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 ZNF367Q7RTV3 350 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 SUN3Q8TAQ9 357 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 SLC7A13Q8TCU3 470 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 FAM131CQ96AQ9 280 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 TAS2R16Q9NYV7 291 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 SLC9A8Q9Y2E8 581 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 PCDHGA4Q9Y5G9 962 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 COLEC10Q9Y6Z7 277 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 NINQ8N4C6 2090 aa27.31■■□□□ 1.96
SSBP3-204ENST00000371320 ZW10O43264 779 aa27.3■■□□□ 1.96
SSBP3-204ENST00000371320 CERS1P27544 350 aa27.3■■□□□ 1.96
SSBP3-204ENST00000371320 RGS6P49758 472 aa27.3■■□□□ 1.96
SSBP3-204ENST00000371320 XKP51811 444 aa27.3■■□□□ 1.96
SSBP3-204ENST00000371320 ARFIP1P53367 373 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms